CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_LACSN (Chaperone protein dnaK OS=Lactobacillus sanfranciscensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.245e-31
Identity = 62/90 (68.89%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RIINEPTAAA+AYGLDK+  ++ ILV+DLGGGTFDVS+L + +GVF+VLSTNGDTHLGG+DFDQR+++Y +   KK++G
Sbjct:  133 DAGKIAGLDVKRIINEPTAAALAYGLDKQDKDEKILVYDLGGGTFDVSVLELGDGVFQVLSTNGDTHLGGDDFDQRIIDYLVAEFKKENG 222          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.931e-31
Identity = 64/90 (71.11%), Postives = 77/90 (85.56%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG++AGLNV  I+NEPTAAAIAY LDK G GE N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F +  K+KH
Sbjct:  162 DAGVLAGLNVLSIVNEPTAAAIAYDLDKAGRGELNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRMVNHFHEPFKRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_SYNAS (Chaperone protein dnaK OS=Syntrophus aciditrophicus (strain SB) GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.931e-31
Identity = 67/90 (74.44%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAA+AYGLDKK  EK I VFDLGGGTFD+SIL +  GVFEV STNGDTHLGGEDFDQR+++Y +   KK  G
Sbjct:  156 DAGKIAGLNVLRIINEPTAAALAYGLDKKKDEK-IAVFDLGGGTFDISILELGEGVFEVKSTNGDTHLGGEDFDQRIIDYLVSEFKKDQG 244          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_LACJO (Chaperone protein dnaK OS=Lactobacillus johnsonii GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.931e-31
Identity = 62/90 (68.89%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTA+A+AYGLDK   ++ +LV+DLGGGTFDVSIL + +GVF+VLSTNGDTHLGG+DFDQR+M++ I+  K+++G
Sbjct:  131 DAGKIAGLNVQRIINEPTASALAYGLDKDENDEKVLVYDLGGGTFDVSILQLGDGVFQVLSTNGDTHLGGDDFDQRIMDWLIQNFKEENG 220          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.829e-31
Identity = 64/91 (70.33%), Postives = 78/91 (85.71%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDK--KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGL V RIINEPTAAAIAYGLDK  +G E+N+L+FDLGGGTFDV++LTID G+FEV +TNGDTHLGGEDFD R++ +F +  K+K+
Sbjct:  161 DAGTIAGLEVLRIINEPTAAAIAYGLDKADEGKERNVLIFDLGGGTFDVTLLTIDGGIFEVKATNGDTHLGGEDFDNRLVAHFTEEFKRKN 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.829e-31
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNG-VFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAA+AYGLDK   GE+N+L+FDLGGGTFDVSILTID G +FEV ST GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  158 DAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRMVGHFVEEFKRKH 248          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.829e-31
Identity = 64/91 (70.33%), Postives = 77/91 (84.62%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDK--KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGL V RIINEPTAAAIAYGLDK   G E+N+L+FDLGGGTFDV++LTID G+FEV +TNGDTHLGGEDFD R++ +F +  K+K+
Sbjct:  161 DAGTIAGLEVVRIINEPTAAAIAYGLDKGDDGKERNVLIFDLGGGTFDVTLLTIDRGIFEVKATNGDTHLGGEDFDNRLVTFFTEEFKRKN 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.829e-31
Identity = 65/92 (70.65%), Postives = 78/92 (84.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I+ LNV RIINEP+AAAIAYGLDKKG   GE  +L+FDLGGGTFDVS+L+ID+GVFEVL+T GDTHLGGEDFD R++ +F+   K+KH
Sbjct:  159 DAGTISKLNVQRIINEPSAAAIAYGLDKKGSKSGEIKVLIFDLGGGTFDVSLLSIDDGVFEVLATAGDTHLGGEDFDNRLVNHFVDEFKRKH 250          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.829e-31
Identity = 62/89 (69.66%), Postives = 76/89 (85.39%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLN+ RI+NEPTAAAIAYGLDK   E  I+V+DLGGGTFDVS+L+I+NGVFEV +T GDTHLGGEDFD +++ +F +L +KKH
Sbjct:  207 DAGAIAGLNILRIVNEPTAAAIAYGLDKTEDEHQIIVYDLGGGTFDVSLLSIENGVFEVQATAGDTHLGGEDFDYKLVRHFAQLFQKKH 295          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_LACRJ (Chaperone protein dnaK OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaK PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.829e-31
Identity = 62/90 (68.89%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RIINEPTA+++AYGLDKK  ++ ILV+DLGGGTFDVSIL + +GVF+VLSTNGDTHLGG+DFDQ++M++ I   K++HG
Sbjct:  133 DAGKIAGLDVKRIINEPTASSLAYGLDKKDKDEKILVYDLGGGTFDVSILELGDGVFQVLSTNGDTHLGGDDFDQKIMDWLIDGFKEEHG 222          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_LACSN2.245e-3168.89Chaperone protein dnaK OS=Lactobacillus sanfrancis... [more]
HSP70_PLEWA2.931e-3171.11Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
DNAK_SYNAS2.931e-3174.44Chaperone protein dnaK OS=Syntrophus aciditrophicu... [more]
DNAK_LACJO2.931e-3168.89Chaperone protein dnaK OS=Lactobacillus johnsonii ... [more]
HSP74_TRYBB3.829e-3170.33Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP74_ANOAL3.829e-3173.63Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP70_LEIMA3.829e-3170.33Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HS7C3_DICDI3.829e-3170.65Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
GRP78_KLULA3.829e-3169.6678 kDa glucose-regulated protein homolog OS=Kluyve... [more]
DNAK_LACRJ3.829e-3168.89Chaperone protein dnaK OS=Lactobacillus reuteri (s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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