CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA6 (Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG----VFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYG+DKK G+  + V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD +V+ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGMDKKKGDSVVAVYDLGGGTFDISIIEIDEADGEHTFEVLATNGDTHLGGEDFDNQVINYLVEEFKKDSG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_METPB (Chaperone protein dnaK OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 65/90 (72.22%), Postives = 70/90 (77.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDKK     I V+DLGGGTFDVSIL I +GVFEV STNGDT LGGEDFD RV+EY     KK+ G
Sbjct:  156 DAGKIAGLEVLRIINEPTAAALAYGLDKKKSG-TIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRVVEYLTAEFKKEQG 244          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_METEP (Chaperone protein dnaK OS=Methylobacterium extorquens (strain PA1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 65/90 (72.22%), Postives = 70/90 (77.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDKK     I V+DLGGGTFDVSIL I +GVFEV STNGDT LGGEDFD RV+EY     KK+ G
Sbjct:  156 DAGKIAGLEVLRIINEPTAAALAYGLDKKKAG-TIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRVVEYLTAEFKKEQG 244          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_METC4 (Chaperone protein dnaK OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 65/90 (72.22%), Postives = 70/90 (77.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDKK     I V+DLGGGTFDVSIL I +GVFEV STNGDT LGGEDFD RV+EY     KK+ G
Sbjct:  156 DAGKIAGLEVLRIINEPTAAALAYGLDKKKAG-TIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRVVEYLTAEFKKEQG 244          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTR (Chaperone protein dnaK OS=Chlamydia trachomatis GN=dnaK PE=1 SV=4)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RII EPTAAA+AYG+DK+G +K I VFDLGGGTFD+SIL I +GVFEVLSTNGDTHLGG+DFD  ++ + +   KK+ G
Sbjct:  159 DAGRIAGLDVKRIIPEPTAAALAYGIDKEG-DKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEG 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTB (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RII EPTAAA+AYG+DK+G +K I VFDLGGGTFD+SIL I +GVFEVLSTNGDTHLGG+DFD  ++ + +   KK+ G
Sbjct:  159 DAGRIAGLDVKRIIPEPTAAALAYGIDKEG-DKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEG 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTA (Chaperone protein dnaK OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RII EPTAAA+AYG+DK+G +K I VFDLGGGTFD+SIL I +GVFEVLSTNGDTHLGG+DFD  ++ + +   KK+ G
Sbjct:  159 DAGRIAGLDVKRIIPEPTAAALAYGIDKEG-DKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEG 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT2 (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RII EPTAAA+AYG+DK+G +K I VFDLGGGTFD+SIL I +GVFEVLSTNGDTHLGG+DFD  ++ + +   KK+ G
Sbjct:  159 DAGRIAGLDVKRIIPEPTAAALAYGIDKEG-DKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEG 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ACTSZ (Chaperone protein dnaK OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 62/94 (65.96%), Postives = 72/94 (76.60%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD RV+ Y +   KK+ G
Sbjct:  156 DAGRIAGLDVKRIINEPTAAALAYGLDKGKGNQTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRVINYLVDEFKKEQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMA (Chaperone protein dnaK2 OS=Prochlorococcus marinus GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.758e-28
Identity = 60/90 (66.67%), Postives = 73/90 (81.11%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLD+K  E+ ILVFDLGGGTFDVS+L + +GVFEVLST+GDTHLGG+DFD+ ++++     K   G
Sbjct:  155 DAGKIAGLEVLRIINEPTAAALAYGLDRKSNER-ILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKVIVDHLAATFKANEG 243          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PSEA66.758e-2863.83Chaperone protein dnaK OS=Pseudoalteromonas atlant... [more]
DNAK_METPB6.758e-2872.22Chaperone protein dnaK OS=Methylobacterium populi ... [more]
DNAK_METEP6.758e-2872.22Chaperone protein dnaK OS=Methylobacterium extorqu... [more]
DNAK_METC46.758e-2872.22Chaperone protein dnaK OS=Methylobacterium chlorom... [more]
DNAK_CHLTR6.758e-2867.78Chaperone protein dnaK OS=Chlamydia trachomatis GN... [more]
DNAK_CHLTB6.758e-2867.78Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLTA6.758e-2867.78Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLT26.758e-2867.78Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_ACTSZ6.758e-2865.96Chaperone protein dnaK OS=Actinobacillus succinoge... [more]
DNAK2_PROMA6.758e-2866.67Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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