CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_HAES1 (Chaperone protein dnaK OS=Haemophilus somnus (strain 129Pt) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 62/94 (65.96%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD RV+ Y +   KK+ G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGKGNQTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRVINYLVDEFKKEQG 249
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ENT38 (Chaperone protein dnaK OS=Enterobacter sp. (strain 638) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK+ G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y +   KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKEVGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRMINYLVDEFKKDQG 249
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ECOUT (Chaperone protein dnaK OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQG 249
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLI (Chaperone protein dnaK OS=Escherichia coli (strain K12) GN=dnaK PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQG 249
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLC (Chaperone protein dnaK OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQG 249
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ECOL6 (Chaperone protein dnaK OS=Escherichia coli O6 GN=dnaK PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQG 249
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ECOL5 (Chaperone protein dnaK OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQG 249
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ECOK1 (Chaperone protein dnaK OS=Escherichia coli O1:K1 / APEC GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQG 249
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ECOHS (Chaperone protein dnaK OS=Escherichia coli O9:H4 (strain HS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQG 249
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ECO57 (Chaperone protein dnaK OS=Escherichia coli O157:H7 GN=dnaK PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQG 249
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_HAES18.826e-2865.96Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_ENT388.826e-2864.89Chaperone protein dnaK OS=Enterobacter sp. (strain... [more]
DNAK_ECOUT8.826e-2864.89Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLI8.826e-2864.89Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLC8.826e-2864.89Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOL68.826e-2864.89Chaperone protein dnaK OS=Escherichia coli O6 GN=d... [more]
DNAK_ECOL58.826e-2864.89Chaperone protein dnaK OS=Escherichia coli O6:K15:... [more]
DNAK_ECOK18.826e-2864.89Chaperone protein dnaK OS=Escherichia coli O1:K1 /... [more]
DNAK_ECOHS8.826e-2864.89Chaperone protein dnaK OS=Escherichia coli O9:H4 (... [more]
DNAK_ECO578.826e-2864.89Chaperone protein dnaK OS=Escherichia coli O157:H7... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
back to top