CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ECO24 (Chaperone protein dnaK OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y ++  KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAT (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y +   KK+ G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGKGNRTIAVYDLGGGTFDISIIEIDEVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVTEFKKEQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAI (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y +   KK+ G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGKGNRTIAVYDLGGGTFDISIIEIDEVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVTEFKKEQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_BUCA5 (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y +   KK+ G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKGKGNRTIAVYDLGGGTFDISIIEIDEVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVTEFKKEQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_BAUCH (Chaperone protein dnaK OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=dnaK PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDN----GVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK+ G + I V+DLGGGTFD+SI+ ID+      FEVL+TNGDTHLGGEDFD R++ Y +   KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKEIGNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVDEFKKDQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK2_COLP3 (Chaperone protein dnaK 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.826e-28
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYG+DK+ G+K + V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y +   KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGMDKQEGDKVVAVYDLGGGTFDISIIEIDEMDGEHTFEVLATNGDTHLGGEDFDNRLINYLVAEFKKDQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_STRPZ (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 56/90 (62.22%), Postives = 75/90 (83.33%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RI+NEPTAAA+AYG+DK   ++ ILVFDLGGGTFDVSIL + +GVF+VL+T GD  LGG+DFDQ+++++ ++  KK++G
Sbjct:  130 DAGKIAGLEVERIVNEPTAAALAYGMDKTDKDEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVEEFKKENG 219          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_STRAG (Chaperone protein dnaK OS=Streptococcus agalactiae GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 56/90 (62.22%), Postives = 75/90 (83.33%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RI+NEPTAAA+AYG+DK   ++ ILVFDLGGGTFDVSIL + +GVF+VL+T GD  LGG+DFDQ+++++ ++  KK++G
Sbjct:  130 DAGKIAGLEVERIVNEPTAAALAYGMDKTDKDEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVEEFKKENG 219          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_STRA5 (Chaperone protein dnaK OS=Streptococcus agalactiae serotype V GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 56/90 (62.22%), Postives = 75/90 (83.33%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RI+NEPTAAA+AYG+DK   ++ ILVFDLGGGTFDVSIL + +GVF+VL+T GD  LGG+DFDQ+++++ ++  KK++G
Sbjct:  130 DAGKIAGLEVERIVNEPTAAALAYGMDKTDKDEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVEEFKKENG 219          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_STRA3 (Chaperone protein dnaK OS=Streptococcus agalactiae serotype III GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 56/90 (62.22%), Postives = 75/90 (83.33%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RI+NEPTAAA+AYG+DK   ++ ILVFDLGGGTFDVSIL + +GVF+VL+T GD  LGG+DFDQ+++++ ++  KK++G
Sbjct:  130 DAGKIAGLEVERIVNEPTAAALAYGMDKTDKDEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVEEFKKENG 219          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_ECO248.826e-2864.89Chaperone protein dnaK OS=Escherichia coli O139:H2... [more]
DNAK_BUCAT8.826e-2864.89Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BUCAI8.826e-2864.89Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BUCA58.826e-2864.89Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BAUCH8.826e-2864.89Chaperone protein dnaK OS=Baumannia cicadellinicol... [more]
DNAK2_COLP38.826e-2863.83Chaperone protein dnaK 2 OS=Colwellia psychrerythr... [more]
DNAK_STRPZ1.153e-2762.22Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_STRAG1.153e-2762.22Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_STRA51.153e-2762.22Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_STRA31.153e-2762.22Chaperone protein dnaK OS=Streptococcus agalactiae... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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