CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_LACSS (Chaperone protein dnaK OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 56/90 (62.22%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RIINEPTA+A+AYGLDK   ++ +LV+DLGGGTFDVS+L + +GVF+VLSTNGDT LGG+DFD+ +M + ++  K  +G
Sbjct:  131 DAGKIAGLDVKRIINEPTASALAYGLDKTETDEKVLVYDLGGGTFDVSVLELGDGVFQVLSTNGDTRLGGDDFDEAIMNWLVENFKSDNG 220          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_LACSK (Chaperone protein dnaK OS=Lactobacillus sakei GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 56/90 (62.22%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RIINEPTA+A+AYGLDK   ++ +LV+DLGGGTFDVS+L + +GVF+VLSTNGDT LGG+DFD+ +M + ++  K  +G
Sbjct:  131 DAGKIAGLDVKRIINEPTASALAYGLDKTETDEKVLVYDLGGGTFDVSVLELGDGVFQVLSTNGDTRLGGDDFDEAIMNWLVENFKSDNG 220          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP7 (Chaperone protein dnaK OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK+ G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y +   KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKEVGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_KLEP3 (Chaperone protein dnaK OS=Klebsiella pneumoniae (strain 342) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK+ G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y +   KK  G
Sbjct:  156 DAGRIAGLEVKRIINEPTAAALAYGLDKEVGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSW (Chaperone protein dnaK OS=Geobacillus sp. (strain WCH70) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 59/90 (65.56%), Postives = 75/90 (83.33%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK+  ++ ILV+DLGGGTFDVSIL + +GVFEV +T GD HLGG+DFDQ +++Y ++  K++HG
Sbjct:  130 DAGRIAGLEVERIINEPTAAALAYGLDKEE-DQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVEQFKQEHG 218          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ERWT9 (Chaperone protein dnaK OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RIINEPTAAA+AYGLDK  G + I V+DLGGGTFD+SI+ ID       FEVL+TNGDTHLGGEDFD R++ Y +   KK  G
Sbjct:  156 DAGRIAGLDVKRIINEPTAAALAYGLDKGQGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRMINYLVAEFKKDQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_EDWI9 (Chaperone protein dnaK OS=Edwardsiella ictaluri (strain 93-146) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 60/94 (63.83%), Postives = 73/94 (77.66%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDN----GVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL+V RIINEPTAAA+AYG+DK  G + I V+DLGGGTFD+SI+ ID+      FEVL+TNGDTHLGGEDFD R++ Y +   KK+ G
Sbjct:  156 DAGRIAGLDVKRIINEPTAAALAYGMDKGVGNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVDEFKKEQG 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_DICTD (Chaperone protein dnaK OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 60/90 (66.67%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK+G +K ILVFDLGGGTFDVSIL I  GVFEV++T G+  LGG+DFD+R++ + I+   ++HG
Sbjct:  132 DAGAIAGLEVVRIINEPTAAALAYGLDKEGHQK-ILVFDLGGGTFDVSILEIGEGVFEVIATAGNNRLGGDDFDERIVNWLIENFMEEHG 220          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_DEIGD (Chaperone protein dnaK OS=Deinococcus geothermalis (strain DSM 11300) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 59/88 (67.05%), Postives = 72/88 (81.82%), Query Frame = 2
Query:    5 AGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            AG IAGLNV R+INEPTAAA+AYGL++KG E  +LVFDLGGGTFDV+IL +  GVFEV ST GDTHLGG DFDQR++ +  +  +K+H
Sbjct:  154 AGEIAGLNVLRVINEPTAAALAYGLERKGNE-TVLVFDLGGGTFDVTILELGEGVFEVRSTAGDTHLGGADFDQRIVNWLAEEFRKEH 240          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_BACV8 (Chaperone protein dnaK OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 58/90 (64.44%), Postives = 70/90 (77.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            +AG IAGL V RI+NEPTAAA+AYGLDK   +  I VFDLGGGTFD+SIL    GVFEVLSTNGDTHLGG+DFDQ ++++ ++  K   G
Sbjct:  154 EAGQIAGLEVKRIVNEPTAAALAYGLDKAHKDMKIAVFDLGGGTFDISILEFGGGVFEVLSTNGDTHLGGDDFDQVIIDWLVQEFKNDEG 243          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_LACSS1.153e-2762.22Chaperone protein dnaK OS=Lactobacillus sakei subs... [more]
DNAK_LACSK1.153e-2762.22Chaperone protein dnaK OS=Lactobacillus sakei GN=d... [more]
DNAK_KLEP71.153e-2764.89Chaperone protein dnaK OS=Klebsiella pneumoniae su... [more]
DNAK_KLEP31.153e-2764.89Chaperone protein dnaK OS=Klebsiella pneumoniae (s... [more]
DNAK_GEOSW1.153e-2765.56Chaperone protein dnaK OS=Geobacillus sp. (strain ... [more]
DNAK_ERWT91.153e-2764.89Chaperone protein dnaK OS=Erwinia tasmaniensis (st... [more]
DNAK_EDWI91.153e-2763.83Chaperone protein dnaK OS=Edwardsiella ictaluri (s... [more]
DNAK_DICTD1.153e-2766.67Chaperone protein dnaK OS=Dictyoglomus turgidum (s... [more]
DNAK_DEIGD1.153e-2767.05Chaperone protein dnaK OS=Deinococcus geothermalis... [more]
DNAK_BACV81.153e-2764.44Chaperone protein dnaK OS=Bacteroides vulgatus (st... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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