CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_BACTR (Chaperone protein dnaK OS=Bacillus thermoglucosidasius GN=dnaK PE=2 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 59/90 (65.56%), Postives = 75/90 (83.33%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYGLDK+  ++ ILV+DLGGGTFDVSIL + +GVFEV +T GD HLGG+DFDQ +++Y ++  K++HG
Sbjct:  127 DAGRIAGLQVERIINEPTAAALAYGLDKEE-DQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVEQFKQEHG 215          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_BACFR (Chaperone protein dnaK OS=Bacteroides fragilis GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 58/90 (64.44%), Postives = 70/90 (77.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            +AG IAGL V RI+NEPTAAA+AYGLDK   +  I VFDLGGGTFD+SIL    GVFEVLSTNGDTHLGG+DFDQ ++++ ++  K   G
Sbjct:  154 EAGQIAGLEVKRIVNEPTAAALAYGLDKAHKDMKIAVFDLGGGTFDISILEFGGGVFEVLSTNGDTHLGGDDFDQVIIDWLVQEFKNDEG 243          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_BACFN (Chaperone protein dnaK OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 58/90 (64.44%), Postives = 70/90 (77.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            +AG IAGL V RI+NEPTAAA+AYGLDK   +  I VFDLGGGTFD+SIL    GVFEVLSTNGDTHLGG+DFDQ ++++ ++  K   G
Sbjct:  154 EAGQIAGLEVKRIVNEPTAAALAYGLDKAHKDMKIAVFDLGGGTFDISILEFGGGVFEVLSTNGDTHLGGDDFDQVIIDWLVQEFKNDEG 243          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK2_ANASP (Chaperone protein dnaK2 OS=Anabaena sp. (strain PCC 7120) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.153e-27
Identity = 57/90 (63.33%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAG+ V RIINEPTAA++AYG DKK  E  ILVFDLGGGTFDVS+L + +GVFEVL+T+GDTHLGG+DFD++++++  +  +K  G
Sbjct:  155 DAGKIAGIEVMRIINEPTAASLAYGFDKKSNE-TILVFDLGGGTFDVSVLEVGDGVFEVLATSGDTHLGGDDFDKKIVDFLAEQFRKDEG 243          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP75_CHICK (Stress-70 protein, mitochondrial OS=Gallus gallus GN=HSPA9 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.506e-27
Identity = 60/88 (68.18%), Postives = 72/88 (81.82%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKK 265
            DAG I+GLNV R+INEPTAAA+AYGLDK   +K I V+DLGGGTFD+SIL I  GVFEV STNGDT LGGEDFDQ +++Y +K  K++
Sbjct:  209 DAGQISGLNVLRVINEPTAAALAYGLDKSE-DKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLQYIVKEFKRE 295          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_STRSY (Chaperone protein dnaK OS=Streptococcus suis (strain 05ZYH33) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.506e-27
Identity = 57/90 (63.33%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RI+NEPTAAA+AYGLDK   ++ ILVFDLGGGTFDVSIL + +GVF+VL+T GD  LGG+DFDQ+++++ +   KK++G
Sbjct:  130 DAGKIAGLEVERIVNEPTAAALAYGLDKTDKDEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDHMVAEFKKENG 219          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_STRS2 (Chaperone protein dnaK OS=Streptococcus suis (strain 98HAH33) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.506e-27
Identity = 57/90 (63.33%), Postives = 74/90 (82.22%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RI+NEPTAAA+AYGLDK   ++ ILVFDLGGGTFDVSIL + +GVF+VL+T GD  LGG+DFDQ+++++ +   KK++G
Sbjct:  130 DAGKIAGLEVERIVNEPTAAALAYGLDKTDKDEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDHMVAEFKKENG 219          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_SHEDO (Chaperone protein dnaK OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.506e-27
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG----VFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYG+DKK G+  + V+DLGGGTFD+SI+ ID+      FEVL+TNGDTHLGGEDFD R++ Y     KK  G
Sbjct:  155 DAGRIAGLEVKRIINEPTAAALAYGIDKKQGDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKDQG 248          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_ROSDO (Chaperone protein dnaK OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.506e-27
Identity = 61/89 (68.54%), Postives = 71/89 (79.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGL V RIINEPTAAA+AYGLDK+  +  I V+DLGGGTFDV+IL ID+G+FEV STNGDT LGGEDFD R++ Y     KK+H
Sbjct:  155 DAGKIAGLEVLRIINEPTAAALAYGLDKEQTQ-TIAVYDLGGGTFDVTILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADTFKKEH 242          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: DNAK_RICAH (Chaperone protein dnaK OS=Rickettsia akari (strain Hartford) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.506e-27
Identity = 62/90 (68.89%), Postives = 70/90 (77.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGL V RIINEPTAAA+AYG DK    K I V+DLGGGTFDVSIL I +GVFEV STNGDT LGGEDFD R++ + I + KK+ G
Sbjct:  155 DAGKIAGLEVLRIINEPTAAALAYGFDK-AASKTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDTRILNHLIDVFKKESG 243          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BACTR1.153e-2765.56Chaperone protein dnaK OS=Bacillus thermoglucosida... [more]
DNAK_BACFR1.153e-2764.44Chaperone protein dnaK OS=Bacteroides fragilis GN=... [more]
DNAK_BACFN1.153e-2764.44Chaperone protein dnaK OS=Bacteroides fragilis (st... [more]
DNAK2_ANASP1.153e-2763.33Chaperone protein dnaK2 OS=Anabaena sp. (strain PC... [more]
GRP75_CHICK1.506e-2768.18Stress-70 protein, mitochondrial OS=Gallus gallus ... [more]
DNAK_STRSY1.506e-2763.33Chaperone protein dnaK OS=Streptococcus suis (stra... [more]
DNAK_STRS21.506e-2763.33Chaperone protein dnaK OS=Streptococcus suis (stra... [more]
DNAK_SHEDO1.506e-2763.83Chaperone protein dnaK OS=Shewanella denitrificans... [more]
DNAK_ROSDO1.506e-2768.54Chaperone protein dnaK OS=Roseobacter denitrifican... [more]
DNAK_RICAH1.506e-2768.89Chaperone protein dnaK OS=Rickettsia akari (strain... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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