CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.554e-32
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG--GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKKG  GE N+L+FDLGGGTFDVS+L ID G+FEV +T GDTHLGGEDFD R++ +FI+  K+K+
Sbjct:  158 DAGTIAGLNVLRIINEPTAAAIAYGLDKKGSRGEHNVLIFDLGGGTFDVSLLAIDEGIFEVKATAGDTHLGGEDFDNRLVNFFIQEFKRKN 248          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.554e-32
Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I+GLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +FI   K+K+
Sbjct:  160 DAGTISGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKY 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_YEAST (78 kDa glucose-regulated protein homolog OS=Saccharomyces cerevisiae GN=KAR2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.554e-32
Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RI+NEPTAAAIAYGLDK   E  I+V+DLGGGTFDVS+L+I+NGVFEV +T+GDTHLGGEDFD +++   IK  KKKHG
Sbjct:  206 DAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHG 295          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.554e-32
Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RI+NEPTAAAIAYGLDK   E  I+V+DLGGGTFDVS+L+I+NGVFEV +T+GDTHLGGEDFD +++   IK  KKKHG
Sbjct:  192 DAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKTFKKKHG 281          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 2.030e-32
Identity = 64/89 (71.91%), Postives = 80/89 (89.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKKG E+++L+FDLGGGTFDVS+L+I++G+FEV +T GDTHLGGEDFD R++ +FI+  K+K+
Sbjct:  158 DAGTIAGLNVLRIINEPTAAAIAYGLDKKGKEEHVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKN 246          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.030e-32
Identity = 65/92 (70.65%), Postives = 80/92 (86.96%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+I+GLNV RIINEPTAAAIAYGLDKK    GEKN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++  K+K+
Sbjct:  164 DAGVISGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKN 255          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 137.502 bits (345), Expect = 2.030e-32
Identity = 64/89 (71.91%), Postives = 80/89 (89.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKKG E+++L+FDLGGGTFDVS+L+I++G+FEV +T GDTHLGGEDFD R++ +FI+  K+K+
Sbjct:  158 DAGTIAGLNVLRIINEPTAAAIAYGLDKKGKEEHVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKN 246          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.030e-32
Identity = 65/90 (72.22%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I+GLNV RIINEPTAAAIAYGLDKK  GE+N+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  158 DAGTISGLNVLRIINEPTAAAIAYGLDKKTVGERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKH 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.030e-32
Identity = 65/90 (72.22%), Postives = 77/90 (85.56%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK  GE+N+L+ DLGGGTFDVS+LTI+ G+FEV ST GDTH GGEDFD R++ +F+   K+KH
Sbjct:  157 DAGLIAGLNVLRIINEPTAAAIAYGLDKKAEGERNVLILDLGGGTFDVSLLTIEEGIFEVKSTAGDTHFGGEDFDNRLVNHFVNEFKRKH 246          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 2.030e-32
Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I+ LNV RIINEPTAAAIAYGL+KKG GEKNIL+FDLGGGTFDVS+LTI++GVFEV +T GDTHLGGEDFD R++ +F+   K+KH
Sbjct:  158 DAGTISKLNVQRIINEPTAAAIAYGLEKKGSGEKNILIFDLGGGTFDVSLLTIEDGVFEVKATAGDTHLGGEDFDNRLVSHFVDEFKRKH 247          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_CANAL1.554e-3273.63Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_ONCMY1.554e-3274.44Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
GRP78_YEAST1.554e-3272.2278 kDa glucose-regulated protein homolog OS=Saccha... [more]
GRP78_CANGA1.554e-3272.2278 kDa glucose-regulated protein homolog OS=Candid... [more]
HSP72_YEAST2.030e-3271.91Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP72_SOLLC2.030e-3270.65Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP71_YEAST2.030e-3271.91Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP71_PUCGR2.030e-3272.22Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP71_PARBA2.030e-3272.22Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HS7C1_DICDI2.030e-3274.44Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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