CF503813

Overview
NameCF503813
Unique NameCF503813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length501
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5211 contig Csv1_Contig5211:47..547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 5.991e-26
Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 3
Query:    3 KVKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEV 437
            K+KP            F   V+KAM  S + +P IFA+SNPT  AECTA DA+       +FASGSPFE V L +G++    Q NN Y+FPG+ L  +L  AR I+D +  +AA+ L + +TD E+ +G LYPS+ +I++++A +
Sbjct:  383 KLKPSVIIGVAGAGPLFTHGVIKAMA-SINERPIIFALSNPTAQAECTAEDAYTLTEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAKALTTQLTDAELAQGRLYPSLANIQEVSANI 526          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 7.824e-26
Identity = 66/158 (41.77%), Postives = 92/158 (58.23%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            +KP            F +EV++AM   ++ KP I A+SNPT  +ECTA +A+  +  + +FASGSPF+ V+   G+     QANN Y+FPG GLG ++ GA  + D ML  A+E LAS +T E   KG++YP    IR I+A + A V   A E  LA
Sbjct:  404 IKPTVLIGTSGKGKQFTKEVVEAMANINA-KPLILALSNPTSQSECTAEEAYTWSQGHAIFASGSPFDPVEY-EGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDMLLAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLA 559          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.022e-25
Identity = 64/158 (40.51%), Postives = 93/158 (58.86%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            +KP            F +EV++ M   +  KP I A+SNPT  +ECTA +A+  +    +FASGSPF+ V+   GK+    QANN Y+FPG GLG ++SGA  + D ML  A+E LA+ +++E   KG++YP   +IR I+A + A V   A +  LA
Sbjct:  408 IKPTVLIGSSGAGKTFTKEVVETMASLNE-KPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEY-EGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLA 563          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.335e-25
Identity = 65/143 (45.45%), Postives = 88/143 (61.54%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F +EV++ M  S + KP I A+SNPT  +ECTA  A+  +    +FASGSPF+ V+  NGK+    QANN Y+FPG GLG ++SGA  + D ML  A+E  A  +T E   KG+++P   SIR I+A + A V   A E  LA
Sbjct:  482 FTKEVVETM-SSLNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEY-NGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLA 622          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.071e-25
Identity = 58/158 (36.71%), Postives = 91/158 (57.59%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            +KP            F+E++LK M   +  +P IFA+SNPT  AECTA   +       +FASGSPF+ V L +G+  +  Q NN Y+FPG+ L  +  G R ITD +    AE +A  ++D+ + +G LYP +++IRD++ ++   ++R A +E  A
Sbjct:  357 IKPTALIGVAAIGGAFSEQILKDMAAFNE-RPIIFALSNPTSKAECTAERGYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALAVVACGLRHITDKIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTA 513          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.476e-24
Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAV 449
            +KP            F  +V++AM  S + +P IFA+SNPT  AECTA +A+       +FASGSPF  V L +G++    Q NN+Y+FPG+ L  +L   R I+D +  +AA+ L S +TDEE+ +G LYP + +I++++  +   V
Sbjct:  384 LKPSTIIGVAGAGRLFTPDVIRAMA-SINERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKV 530          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.287e-24
Identity = 61/163 (37.42%), Postives = 91/163 (55.83%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGE 494
            VKP            F E++L+ M  S   +P IFA+SNPT  AECTA   ++      +FASGSPF++V L +GK     Q NN Y+FPG+ LG +  G R I D +    AE +A  ++++ + +G LYP + +IRD++  +   VL  A + +LA  + E
Sbjct:  406 VKPTAIIGVAAIAGAFTEQILRDMA-SFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPE 567          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.287e-24
Identity = 62/151 (41.06%), Postives = 86/151 (56.95%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRA 458
            +KP            F +EV++AM   +  KP IFA+SNPT  +ECTA +A+  +    +FASGSPF  V+  NGK+    QANN Y+FPG GLG ++SGA  + D ML  A+E LA  ++ E   KG   P   +IR I+A +     +A
Sbjct:  393 IKPTVLIGSSGAGRTFTKEVVQAMATFNE-KPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEY-NGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALADEVSQENFEKGTHIPPFSNIRKISAHIAKVAAKA 541          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.287e-24
Identity = 63/158 (39.87%), Postives = 92/158 (58.23%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            +KP            F +E+++AM  S + +P IF++SNPT ++ECTA  A+  +    +FASGSPF  V+   GK     Q+NN Y+FPG+GLG ++SGA  + + ML  A++ LA   T +   KG ++P   SIR I+A + AAV   A E  LA
Sbjct:  455 IKPTVLIGTSGVGRTFTKEIIEAM-SSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVEY-EGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLA 610          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.607e-24
Identity = 59/163 (36.20%), Postives = 91/163 (55.83%), Query Frame = 3
Query:    6 VKPHXXXXXXXXXXXFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGE 494
            VKP            F E++L+ M  S   +P +FA+SNPT  AECTA   ++      +FASGSPF++V L +G+     Q NN Y+FPG+ LG +  G R I D +    AE +A  ++++ + +G LYP + +IRD++  +   VL  A + +LA  + E
Sbjct:  406 VKPTAIIGVAAIAGAFTEQILRDMA-SFHERPIVFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFTPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAVKVLDYAYKHNLASYYPE 567          
The following BLAST results are available for this feature:
BLAST of CF503813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOM_MOUSE5.991e-2642.07NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAOX_MESCR7.824e-2641.77NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_PHAVU1.022e-2540.51NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_FLATR1.335e-2545.45NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PIG5.071e-2536.71NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAOM_HUMAN1.476e-2438.51NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAON_HUMAN3.287e-2437.42NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAOC_SOLLC3.287e-2441.06NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_MAIZE3.287e-2439.87NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAON_MOUSE5.607e-2436.20NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-299 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503813 ID=CF503813; Name=CF503813; organism=Citrus sinensis; type=EST; length=501bp
GAAAGGTCAAACCCCATGTGCTTCTTGGTTTGTCTGGCGTAGGTGGTGTC
TTCAATGAAGAGGTGCTTAAGGCTATGCGAGAGTCTGATTCTGTCAAACC
TGCCATTTTTGCTATGTCAAATCCGACCATGAATGCTGAATGCACTGCTG
CTGATGCTTTTAAGCATGCTGGGGAAAATATAGTGTTTGCTAGTGGAAGT
CCTTTTGAGAATGTTGATCTGGGAAATGGGAAAATAGGCCATGTAAATCA
AGCAAATAACATGTATCTGTTCCCTGGGATTGGTTTGGGAACTCTCCTTT
CAGGTGCTCGTTTTATAACAGATGGAATGTTACAACAAGCTGCAGAATGC
CTTGCGTCCTATATGACCGATGAGGAAATTCCAAAAGGCATTCTGTATCC
ATCTATTGACAGTATTCGAGATATTACGGCAGAAGTTGGAGCAGCTGTTC
TACGAGCAGCAGTTGAGGAAGACTTGGCAGAAGGTCATGGTGAAGTTGGT
C
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