CF503813

Overview
NameCF503813
Unique NameCF503813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length501
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5211 contig Csv1_Contig5211:47..547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.438e-19
Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDL 476
            F EE+++AM  S   +P IF +SNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + AVE+ L
Sbjct:  393 FTEEIIRAMH-SHCARPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETFEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGSGPLLPKLEDIHAVSKHIAFAVGKVAVEQGL 532          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.438e-19
Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F+E+V++ M  +   +P +F +SNPT   E T AD       N + A+GSPFE V + NGK   + Q NN Y+FPGIGLG L   AR +TD ML  ++  LA          G L P ++ I+ ++ ++  AV + A+E+  A
Sbjct:  393 FSEDVIREMH-AHCKRPIVFPLSNPTSRVEATPADIINWTDGNALVATGSPFEPV-VHNGKTYPIAQCNNSYIFPGIGLGILAVNARRVTDEMLMASSRALAECSPLAINGHGALLPPLEDIQKVSRKIAFAVAKKAIEQGKA 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHESA (NAD-dependent malic enzyme OS=Shewanella sp. (strain ANA-3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.184e-19
Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F EE+++AM  S   +P IF +SNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + A+E+ L+
Sbjct:  393 FTEEIVRAMH-SHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLS 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEON (NAD-dependent malic enzyme OS=Shewanella oneidensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.184e-19
Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F EE+++AM  S   +P IF +SNPT   E T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + A+E+ L+
Sbjct:  393 FTEEIVRAMH-SHCPRPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLS 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPA (NAD-dependent malic enzyme OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.093e-19
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEE 470
            F EE++KAM  S   +P +F +SNPT   E T  D         + A+GSPFE V + +     + Q NN Y+FPGIGLG L SGA+ ++D ML  ++  LA         +G L P ++ I  ++  +  AV R A+EE
Sbjct:  393 FTEEIIKAMH-SHCKRPIVFPLSNPTSRVEATPKDILHWTQGQALVATGSPFEPVVVDDVTY-EIAQCNNSYIFPGIGLGVLASGAKRVSDAMLMASSRALAECSPLAIDGEGSLLPKLEDIHKVSKHIAFAVARTAIEE 530          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_SHEHH (NAD-dependent malic enzyme OS=Shewanella halifaxensis (strain HAW-EB4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 9.264e-19
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEE 470
            F EE++KAM  S   +P +F +SNPT   E T  D         + A+GSPFE V + +     + Q NN Y+FPGIGLG L SGA+ ++D ML  ++  LA         +G L P ++ I  ++  +  AV R A+EE
Sbjct:  393 FTEEIIKAMH-SHCPRPIVFPLSNPTSRVEATPKDILHWTQGKALVATGSPFEPVVIDDTTY-EIAQCNNSYIFPGIGLGVLASGAKRVSDAMLMASSRALAECSPLAIDGEGSLLPKLEDIHLVSKRIAFAVARVAIEE 530          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_VIBVU (NAD-dependent malic enzyme OS=Vibrio vulnificus GN=sfcA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.695e-18
Identity = 50/143 (34.97%), Postives = 80/143 (55.94%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F +EV++ M +    +P +F +SNPT   E   AD  +    + + A+GSPF+ V +  GK   + Q NN Y+FPGIGLG L   A+ +TD ML +++  LA+        KG L P ++ I  ++  +  AV + A+E+ +A
Sbjct:  393 FTQEVIQEMHKH-CPRPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDPV-IHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGKGALLPPLEEIHTVSKRIAYAVAKKAIEQGVA 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.695e-18
Identity = 50/143 (34.97%), Postives = 80/143 (55.94%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F +EV++ M +    +P +F +SNPT   E   AD  +    + + A+GSPF+ V +  GK   + Q NN Y+FPGIGLG L   A+ +TD ML +++  LA+        KG L P ++ I  ++  +  AV + A+E+ +A
Sbjct:  393 FTQEVIQEMHKH-CPRPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDPV-IHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGKGALLPPLEEIHTVSKRIAYAVAKKAIEQGVA 533          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.520e-18
Identity = 52/143 (36.36%), Postives = 80/143 (55.94%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F +EV++A+  +++  P +  +SNPT   E T  +    +    + A+GSPF N     G+   V+Q NN Y+FPGIGLG L + A  I+D ML  A++ LA    + E   G + P I  IR+I+ ++  AV   A+E+ LA
Sbjct:  391 FTQEVVEALC-ANTEHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPFPNTTF-EGQSYEVSQCNNSYIFPGIGLGVLAARATGISDNMLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLA 531          
BLAST of CF503813 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.597e-18
Identity = 51/143 (35.66%), Postives = 80/143 (55.94%), Query Frame = 3
Query:   51 FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 479
            F+EEV+K M +    +P +F +SNPT   E T  D  +      + A+GSPFE V +  G+   + Q NN Y+FPGIGLG L   A+ +TD ML +++  LA+         G L P ++ I  ++ ++  AV + A+E+ +A
Sbjct:  393 FSEEVIKEMHKHCK-RPIVFPLSNPTSRVEATPNDIIRWTNGEALVATGSPFEPV-VHEGRSYPIAQCNNSYIFPGIGLGVLAVNAKRVTDEMLMESSRALATCSPLAINGNGALLPPLEEIHLVSKKIAFAVAKKAIEQGVA 533          
The following BLAST results are available for this feature:
BLAST of CF503813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHEB22.438e-1938.03NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO11_PHOPR2.438e-1937.76NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_SHESA3.184e-1937.06NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEON3.184e-1937.06NAD-dependent malic enzyme OS=Shewanella oneidensi... [more]
MAO1_SHEPA7.093e-1937.86NAD-dependent malic enzyme OS=Shewanella pealeana ... [more]
MAO1_SHEHH9.264e-1937.86NAD-dependent malic enzyme OS=Shewanella halifaxen... [more]
MAO1_VIBVU2.695e-1834.97NAD-dependent malic enzyme OS=Vibrio vulnificus GN... [more]
MAO11_VIBVY2.695e-1834.97NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]
MAO1_PSYCK3.520e-1836.36NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO1_VIBHB4.597e-1835.66NAD-dependent malic enzyme OS=Vibrio harveyi (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-299 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503813 ID=CF503813; Name=CF503813; organism=Citrus sinensis; type=EST; length=501bp
GAAAGGTCAAACCCCATGTGCTTCTTGGTTTGTCTGGCGTAGGTGGTGTC
TTCAATGAAGAGGTGCTTAAGGCTATGCGAGAGTCTGATTCTGTCAAACC
TGCCATTTTTGCTATGTCAAATCCGACCATGAATGCTGAATGCACTGCTG
CTGATGCTTTTAAGCATGCTGGGGAAAATATAGTGTTTGCTAGTGGAAGT
CCTTTTGAGAATGTTGATCTGGGAAATGGGAAAATAGGCCATGTAAATCA
AGCAAATAACATGTATCTGTTCCCTGGGATTGGTTTGGGAACTCTCCTTT
CAGGTGCTCGTTTTATAACAGATGGAATGTTACAACAAGCTGCAGAATGC
CTTGCGTCCTATATGACCGATGAGGAAATTCCAAAAGGCATTCTGTATCC
ATCTATTGACAGTATTCGAGATATTACGGCAGAAGTTGGAGCAGCTGTTC
TACGAGCAGCAGTTGAGGAAGACTTGGCAGAAGGTCATGGTGAAGTTGGT
C
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