CF503815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503815 vs. ExPASy Swiss-Prot
Match: ADO3_ORYSJ (Adagio-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0547000 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.135e-11 Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 85 DCPIMYASSGFFSMTGYSSKEVIGRNCRFLQ---------GPETDKNEVEKIRDAVRNGKSYCGRLLNYKKDGTPFWNLLTVTPI 312 D P++Y ++ F + TGY + EV+GRNCRFLQ P D V +IR + G + G LLN++KDG P +N L + P+ Sbjct: 76 DFPVIYVNAAFEAATGYRADEVLGRNCRFLQFRDPRAQRRHPLVDPMVVSEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPM 160
BLAST of CF503815 vs. ExPASy Swiss-Prot
Match: KCNH4_RAT (Potassium voltage-gated channel subfamily H member 4 OS=Rattus norvegicus GN=Kcnh4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.483e-11 Identity = 31/78 (39.74%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 91 PIMYASSGFFSMTGYSSKEVIGR--NCRFLQGPETDKNEVEKIRDAVRNGKSYCGRLLNYKKDGTPFWNLLTVTPIKD 318 PI+Y S GF +TGY EV+ + +CRFL GPET + +++++ A+ + + + Y+KDG+ FW LL + PIK+ Sbjct: 41 PIVYCSDGFCELTGYGRTEVMQKTCSCRFLYGPETSEPALQRLQKALEGHQEHRAEICFYRKDGSAFWCLLDMMPIKN 118
BLAST of CF503815 vs. ExPASy Swiss-Prot
Match: KCNH4_HUMAN (Potassium voltage-gated channel subfamily H member 4 OS=Homo sapiens GN=KCNH4 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.936e-11 Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 91 PIMYASSGFFSMTGYSSKEVIGR--NCRFLQGPETDKNEVEKIRDAVRNGKSYCGRLLNYKKDGTPFWNLLTVTPIKD 318 PI+Y S GF +TGY EV+ + +CRFL GPET + ++++ A+ + + + Y+KDG+ FW LL + PIK+ Sbjct: 41 PIVYCSDGFCELTGYGRTEVMQKTCSCRFLYGPETSEPALQRLHKALEGHQEHRAEICFYRKDGSAFWCLLDMMPIKN 118
BLAST of CF503815 vs. ExPASy Swiss-Prot
Match: KCNH5_RAT (Potassium voltage-gated channel subfamily H member 5 OS=Rattus norvegicus GN=Kcnh5 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.610e-11 Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 85 DCPIMYASSGFFSMTGYSSKEVIGRN--CRFLQGPETDKNEVEKIRDAVRNGKSYCGRLLNYKKDGTPFWNLLTVTPIKD 318 D P++Y++ GF ++GY +V+ ++ C F+ G TDK +EK+R N +S C +L YKK+ TP W + + PI++ Sbjct: 37 DWPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRN 116
BLAST of CF503815 vs. ExPASy Swiss-Prot
Match: KCNH5_MOUSE (Potassium voltage-gated channel subfamily H member 5 OS=Mus musculus GN=Kcnh5 PE=2 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.610e-11 Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 85 DCPIMYASSGFFSMTGYSSKEVIGRN--CRFLQGPETDKNEVEKIRDAVRNGKSYCGRLLNYKKDGTPFWNLLTVTPIKD 318 D P++Y++ GF ++GY +V+ ++ C F+ G TDK +EK+R N +S C +L YKK+ TP W + + PI++ Sbjct: 37 DWPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRN 116
BLAST of CF503815 vs. ExPASy Swiss-Prot
Match: KCNH5_HUMAN (Potassium voltage-gated channel subfamily H member 5 OS=Homo sapiens GN=KCNH5 PE=1 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.610e-11 Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 85 DCPIMYASSGFFSMTGYSSKEVIGRN--CRFLQGPETDKNEVEKIRDAVRNGKSYCGRLLNYKKDGTPFWNLLTVTPIKD 318 D P++Y++ GF ++GY +V+ ++ C F+ G TDK +EK+R N +S C +L YKK+ TP W + + PI++ Sbjct: 37 DWPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRN 116 The following BLAST results are available for this feature:
BLAST of CF503815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503815 ID=CF503815; Name=CF503815; organism=Citrus sinensis; type=EST; length=320bpback to top |