CF503816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.064e-16 Identity = 41/88 (46.59%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 25 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 288 ++ +GINGFGRIGRLV RV +++ + +VAVNDPFI +YM YMFKYDS HG++K + ++ K+ + L+ + + ++P+EIPW+ Sbjct: 107 ELTVGINGFGRIGRLVLRVCMEKG-IRVVAVNDPFIDPEYMVYMFKYDSTHGRYKGN-VEHKNGQ-LVVDNLEINTYQCKDPKEIPWS 191
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.696e-16 Identity = 41/97 (42.27%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 1 PRAARIMGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 P+ ++ +GINGFGRIGRLV R +++ V++VAVNDPFI +YM YMFKYDS HG++K ++ ++ + L+ ++V+ + P++IPW + Sbjct: 68 PKMGPAPRELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNGQ-LVVDNHEISVYQCKEPKQIPWRD 161
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_EMENI (Glyceraldehyde-3-phosphate dehydrogenase OS=Emericella nidulans GN=gpdA PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.521e-16 Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 31 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 K+GINGFGRIGR+V R ++ V++VAVNDPFI T Y YM KYDS HGQ+K ++ D+ ++ G+K + R+P IPW + Sbjct: 4 KVGINGFGRIGRIVFRNAIEAGTVDVVAVNDPFIETHYAAYMLKYDSQHGQFK-GTIETYDEGLIVNGKK-IRFHTERDPANIPWGQ 88
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3PC_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Scenedesmus vacuolatus GN=GapC PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.521e-16 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 43 NGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDK-TLLFGEKPVTVFGVRNPEEIPWAE 291 NGFGRIG LV R L R DV++VA+NDPFI +YM YMFKYDSVHG+ +E V+ DK + + + + +P +IPW E Sbjct: 1 NGFGRIGSLVLRATLDRKDVKVVAINDPFIEGEYMAYMFKYDSVHGR---YEGDVQGDKHGITINGEQIKTLAMMDPTQIPWGE 81
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_TRIAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Trichoderma atroviride GN=gpd1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.599e-16 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 +K+GINGFGRIGR++ L++ ++ +VAVNDPFI Y YM KYDS HG +K +++V D + L+ KP+ + R+P I W+E Sbjct: 3 IKVGINGFGRIGRILLSNALEKPELSVVAVNDPFIEPTYAAYMLKYDSSHGLFK-GDIEV-DGQNLVVNGKPIRFYSERDPANIKWSE 88
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.599e-16 Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 31 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWA 288 K+GINGFGRIGR+V R + +++VAVNDPFI DYM YMFKYDS HG+++ ++ K K ++ G + V R+P I W+ Sbjct: 5 KVGINGFGRIGRIVLRNAILTGKIQVVAVNDPFIDLDYMAYMFKYDSTHGRFE-GSVETKGGKLVIDGHS-IDVHNERDPANIKWS 88
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.006e-16 Identity = 43/101 (42.57%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 1 PRAARIMGK----VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 P+AA++ G V GINGFGRIGRLVAR++++ + +L+ VN T DYM Y FKYDS+HG+++ ++ V D ++ G++ +T R+P++I WA+ Sbjct: 36 PKAAKMTGPTMQAVPCGINGFGRIGRLVARIMIKDPETKLLQVNAGSATPDYMAYQFKYDSIHGRYQ-GDVVVDGDDLVIDGQRVITT-RARDPKDIGWAK 134
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_MYCPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma pneumoniae GN=gapA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.844e-16 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 +++ INGFGRIGRLV R +L + ++E+VAVND D + ++ KYDS HG++K + V D TL+ +K V VF ++P +PWAE Sbjct: 8 IRVAINGFGRIGRLVFRALLSQKNIEIVAVND-LTHPDTLAHLLKYDSAHGEFK--KKVVAKDNTLMIDKKKVLVFSEKDPANLPWAE 92
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.024e-15 Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 31 KIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQW------KHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPW 285 ++GINGFGRIGRLV RV+L R +V +NDPFITTD M Y+FKYD+VHG++ K +L++ TL + V +NP EIPW Sbjct: 4 RVGINGFGRIGRLVLRVLLSRGMPANVVLINDPFITTDAMAYIFKYDTVHGRFPGTVVGKEGKLEI----TLNGHVYDIAVSACKNPAEIPW 91
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P1_JACOR (Glyceraldehyde-3-phosphate dehydrogenase, muscle OS=Jaculus orientalis PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.024e-15 Identity = 44/116 (37.93%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD--------------DKT--------------LLFGEKPVTVFGVRNPEEIPWAE 291 VK+G+NGFGRIGRLV R V++VA+NDPFI +YM YMFKYDS HG++K + + D D T L+ +T+F R+P +I W + Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFKYDSTHGKFKVDIVAINDPFIDLNYMVYMFKYDSTHGKFKGTVKAENGKLVINGHAITIFQERDPSKIKWGD 117 The following BLAST results are available for this feature:
BLAST of CF503816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503816 ID=CF503816; Name=CF503816; organism=Citrus sinensis; type=EST; length=291bpback to top |