CF503840

Overview
NameCF503840
Unique NameCF503840
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length430
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.193e-30
Identity = 63/115 (54.78%), Postives = 84/115 (73.04%), Query Frame = 1
Query:   88 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            MA  + +  L TG K+P +GLGTW+S PG V +AV  A+  GYRHIDCA +YGNE E+G  +K+    D  +KRE++++TSKLWN  H P+DV  AL +TL++LQ+DYLDLYLMH
Sbjct:    1 MATSVEYETLYTGQKMPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMH 115          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.193e-30
Identity = 62/107 (57.94%), Postives = 79/107 (73.83%), Query Frame = 1
Query:  112 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            +L+TG K+P +GLGTW+S+PG V  A+  A+  GYRHIDCA +YGNE EIG  LK+       V RE+L++TSKLWN  H PEDV  A+ +TL DLQ++YLDLYLMH
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMH 113          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 4.535e-30
Identity = 63/107 (58.88%), Postives = 78/107 (72.90%), Query Frame = 1
Query:  112 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            +L+TG K+P +GLGTW+S+PG V  A+  A+  GYRHIDCA IYGNE EIG  L +       V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMH
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMH 113          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.923e-30
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            L  G KIP +GLGTW+S+PG V  AV  A+  GYRH+DCA  Y NE EIG   ++    + V+KREDL++TSKLWN  H PEDV  AL +TL DL++DYLDLYLMH
Sbjct:   10 LYNGQKIPLIGLGTWKSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMH 115          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 7.736e-30
Identity = 60/106 (56.60%), Postives = 77/106 (72.64%), Query Frame = 1
Query:  112 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            +LN GAK+P +GLGTW+S PG V  AV  AI  GYRHIDCA +Y NE E+G+ +++   + VVKRE+L+I SKLW  YHE   V  A  +TL DL++DYLDLYL+H
Sbjct:    6 LLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIH 111          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: YDG7_SCHPO (Uncharacterized oxidoreductase C26F1.07 OS=Schizosaccharomyces pombe GN=SPAC26F1.07 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.010e-29
Identity = 60/108 (55.56%), Postives = 80/108 (74.07%), Query Frame = 1
Query:  106 HFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            HF L  G+KIP +GLGTW+S+P    NAV  A++ GYRHID A IYGNE E+G  +K    ++ V R+D+W+TSKLW   H PE VP+AL++TL+DL++DYLD YL+H
Sbjct:   15 HFTLADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK----ESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIH 118          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: A1A1B_DANRE (Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=akr1a1b PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.010e-29
Identity = 59/107 (55.14%), Postives = 83/107 (77.57%), Query Frame = 1
Query:  112 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            VL+TG K+P +GLGTW+S+PG+V  AV  A+++GYRHIDCA IY NE EIG   ++    D  ++RED+++TSKLWN  H P+DV  +L +TL+DL+++YLDLYL+H
Sbjct:    6 VLSTGRKMPLLGLGTWKSEPGLVKQAVIWALESGYRHIDCAPIYANEPEIGEAFQETMGPDKGIRREDVFVTSKLWNTKHHPDDVEPSLLKTLKDLKLEYLDLYLIH 112          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 2.251e-29
Identity = 60/108 (55.56%), Postives = 77/108 (71.30%), Query Frame = 1
Query:  106 HFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            H VL  GAK+P +GLGTW+S PG V  AV  AI  GYRHIDCA +Y NE E+G+ L++  ++ VVKRE+L+I SKLW   H+   V  A  +TL DL++DYLDLYL+H
Sbjct:    4 HLVLYNGAKMPILGLGTWKSPPGQVTEAVKTAIDLGYRHIDCAHVYQNENEVGVALQEKLKEQVVKREELFIVSKLWCTSHDKSLVKGACQKTLNDLKLDYLDLYLIH 111          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: ALDX_SPOSA (Aldehyde reductase 1 OS=Sporobolomyces salmonicolor GN=ARI PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 8.553e-29
Identity = 60/105 (57.14%), Postives = 76/105 (72.38%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LNTGA +  VG GTWQ+ PG VG  V  AI+ GYRH+D A++Y N+ E+G  +K    +A VKREDL+ITSKLWN  H PE V  ALD TL++L ++YLDLYL+H
Sbjct:    7 LNTGASLELVGYGTWQAAPGEVGQGVKVAIETGYRHLDLAKVYSNQPEVGAAIK----EAGVKREDLFITSKLWNNSHRPEQVEPALDDTLKELGLEYLDLYLIH 107          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: ALD1_MOUSE (Aldose reductase-related protein 1 OS=Mus musculus GN=Akr1b7 PE=2 SV=4)

HSP 1 Score: 125.176 bits (313), Expect = 1.117e-28
Identity = 60/105 (57.14%), Postives = 76/105 (72.38%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            L+T AK+P VGLGTW+S PG V  AV AAI AGYRHIDCA +Y NE E+G  +++  ++  VKREDL+I SKLW  + E   V +A   TL DL++DYLDLYL+H
Sbjct:    7 LSTKAKMPLVGLGTWKSSPGQVKEAVKAAIDAGYRHIDCAYVYHNENEVGEAIQEKIKENAVKREDLFIVSKLWATFFEKSLVKKAFQNTLSDLKLDYLDLYLVH 111          
The following BLAST results are available for this feature:
BLAST of CF503840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
AK1A1_XENLA1.193e-3054.78Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
AK1A1_RAT1.193e-3057.94Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_PIG4.535e-3058.88Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
AK1A1_CHICK5.923e-3058.49Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
ALDR_HUMAN7.736e-3056.60Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
YDG7_SCHPO1.010e-2955.56Uncharacterized oxidoreductase C26F1.07 OS=Schizos... [more]
A1A1B_DANRE1.010e-2955.14Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=... [more]
ALDR_RABIT2.251e-2955.56Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
ALDX_SPOSA8.553e-2957.14Aldehyde reductase 1 OS=Sporobolomyces salmonicolo... [more]
ALD1_MOUSE1.117e-2857.14Aldose reductase-related protein 1 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-327 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503840 ID=CF503840; Name=CF503840; organism=Citrus sinensis; type=EST; length=430bp
GCCGGTGCCTGCTTTTACCTCTGGTCCACTCATTCGCTCACGCTTTTTTG
CTCATTGCTCTCTCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGA
TTCGACACTTCGTGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTA
GGCACGTGGCAGTCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGC
CATCAAGGCTGGATACCGACATATTGATTGTGCTCAAATTTACGGCAATG
AAAAGGAGATTGGTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTC
AAGCGTGAGGATTTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGA
ACCAGAAGATGTACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGA
TTGACTACCTTGATCTATACCTTATGCACT
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