CF503840

Overview
NameCF503840
Unique NameCF503840
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length430
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: XYL1_CANTE (NAD(P)H-dependent D-xylose reductase OS=Candida tenuis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.783e-26
Identity = 54/114 (47.37%), Postives = 81/114 (71.05%), Query Frame = 1
Query:   88 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            M+  I    L++G  +PS+G G W+      G  V  AIKAGYR  D A+ YGNEKE+G  +K+  ++ +VKRE++++TSKLWN YH+P++V  AL++TL DL++DY+DL+L+H
Sbjct:    1 MSASIPDIKLSSGHLMPSIGFGCWKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIH 114          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1BA_HUMAN (Aldo-keto reductase family 1 member B10 OS=Homo sapiens GN=AKR1B10 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.783e-26
Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            L+T AK+P VGLGTW+S  G V  AV  AI AGYRHIDCA +Y NE E+G  +++  ++  VKREDL+I SKLW  + E   V +A ++TL+DL++ YLD+YL+H
Sbjct:    7 LSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIH 111          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.329e-26
Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN G K+P VGLG W+    V  + +  AIK GYR  D AQ Y NEKE+G  + +  ++ +VKREDL + SKLWN++H P++VP AL+RTL DLQ+DY+D++ +H
Sbjct:   10 LNNGEKMPLVGLGCWKMPNDVCADQIYEAIKIGYRLFDGAQDYANEKEVGQGVNRAIKEGLVKREDLVVVSKLWNSFHHPDNVPRALERTLSDLQLDYVDIFYIH 114          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: ALRC_DICDI (Aldose reductase C OS=Dictyostelium discoideum GN=alrC PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.329e-26
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = 1
Query:  106 HFVLNTGAKIPSVGLGTWQSD-PGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            +F LN G +IPS+GLGT+ S+ PG VG+A+  A+K GYRHID A  YGNEK IG  LK+ F++  +KRED++ TSKLWN+ H    V +   +T+ DL I YLDLYL+H
Sbjct:   16 NFKLNDGNQIPSIGLGTYYSENPGEVGDAINNALKNGYRHIDGAAFYGNEKVIGNSLKEIFKEGEIKREDIFYTSKLWNSCHNSNLVVKHCVKTIEDLGIGYLDLYLIH 124          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AKCL2_RAT (1,5-anhydro-D-fructose reductase OS=Rattus norvegicus GN=Akr1e2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.156e-25
Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:  130 KIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            +IP+VGLGTW++ PG V +AV  AI  GYRH DCA +Y NE E+G+ +K+  ++ VVKR++L+I SKLW  YH+   V  A   TL  L +DYLDLYL+H
Sbjct:    3 QIPTVGLGTWKASPGEVTDAVKVAINLGYRHFDCAYLYHNESEVGMGIKEKIKEGVVKRDELFIVSKLWCTYHKQSLVKTACINTLEALNLDYLDLYLIH 102          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AKCL2_MOUSE (1,5-anhydro-D-fructose reductase OS=Mus musculus GN=Akr1e2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.786e-25
Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 1
Query:  133 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            IP+VGLGTW++ PG V +AV  AI  GYRH DCA +Y NE E+G+ + +  ++ VVKREDL++ SKLW   H+   V  A   TL  L +DYLDLYL+H
Sbjct:    4 IPTVGLGTWKASPGEVTDAVKLAINLGYRHFDCAYLYHNESEVGMGISEKIKEGVVKREDLFVVSKLWCTCHKKSLVKTACTNTLEALNLDYLDLYLIH 102          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: XYL2_CANTR (NADPH-dependent D-xylose reductase II,III OS=Candida tropicalis GN=xyrB PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.278e-24
Identity = 50/105 (47.62%), Postives = 76/105 (72.38%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN+G ++P VG G W+ +     + +  AIK GYR  D A+ YGNEKE+G  + +  ++ +VKRE+L+ITSKLWN +H+P++V  AL++TL DL +DY+DL+L+H
Sbjct:   12 LNSGYEMPLVGFGCWKVNNETAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIH 116          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.278e-24
Identity = 50/105 (47.62%), Postives = 75/105 (71.43%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN+G ++P VG G W+       + +  AIK GYR  D A+ YGNEKE+G  + +  ++ +VKRE+L+ITSKLWN +H+P++V  AL++TL DL +DY+DL+L+H
Sbjct:   12 LNSGYEMPLVGFGCWKVTNATAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIH 116          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: GRE3_YEAST (NADPH-dependent aldose reductase GRE3 OS=Saccharomyces cerevisiae GN=GRE3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.669e-24
Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN G K+P VGLG W+ D  V  N +  AIK GYR  D A  YGNEKE+G  ++K   + +V R+D+++ SKLWN +H P+ V  AL +TL D+ +DYLDLY +H
Sbjct:    7 LNNGLKMPLVGLGCWKIDKKVCANQIYEAIKLGYRLFDGACDYGNEKEVGEGIRKAISEGLVSRKDIFVVSKLWNNFHHPDHVKLALKKTLSDMGLDYLDLYYIH 111          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AKCL2_PIG (1,5-anhydro-D-fructose reductase OS=Sus scrofa GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 2.180e-24
Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:  130 KIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            KIP +GLGTWQ+ PG V  AV  AI  GYRH DCA +Y NE E+G+ ++   ++ VV+REDL+I SKLW   H+   V  A  R+L+ L++ YLDLYL+H
Sbjct:    3 KIPVLGLGTWQAAPGEVTEAVKVAIDTGYRHFDCAYLYHNENEVGVGIQAKIDEGVVRREDLFIVSKLWCTCHKKSLVKSACTRSLKALKLQYLDLYLIH 102          
The following BLAST results are available for this feature:
BLAST of CF503840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
XYL1_CANTE1.783e-2647.37NAD(P)H-dependent D-xylose reductase OS=Candida te... [more]
AK1BA_HUMAN1.783e-2653.33Aldo-keto reductase family 1 member B10 OS=Homo sa... [more]
XYL1_KLULA2.329e-2650.48NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
ALRC_DICDI2.329e-2654.13Aldose reductase C OS=Dictyostelium discoideum GN=... [more]
AKCL2_RAT1.156e-2553.001,5-anhydro-D-fructose reductase OS=Rattus norvegi... [more]
AKCL2_MOUSE9.786e-2552.531,5-anhydro-D-fructose reductase OS=Mus musculus G... [more]
XYL2_CANTR1.278e-2447.62NADPH-dependent D-xylose reductase II,III OS=Candi... [more]
XYL1_CANTR1.278e-2447.62NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
GRE3_YEAST1.669e-2449.52NADPH-dependent aldose reductase GRE3 OS=Saccharom... [more]
AKCL2_PIG2.180e-2452.001,5-anhydro-D-fructose reductase OS=Sus scrofa GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-327 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503840 ID=CF503840; Name=CF503840; organism=Citrus sinensis; type=EST; length=430bp
GCCGGTGCCTGCTTTTACCTCTGGTCCACTCATTCGCTCACGCTTTTTTG
CTCATTGCTCTCTCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGA
TTCGACACTTCGTGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTA
GGCACGTGGCAGTCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGC
CATCAAGGCTGGATACCGACATATTGATTGTGCTCAAATTTACGGCAATG
AAAAGGAGATTGGTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTC
AAGCGTGAGGATTTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGA
ACCAGAAGATGTACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGA
TTGACTACCTTGATCTATACCTTATGCACT
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