CF503840

Overview
NameCF503840
Unique NameCF503840
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length430
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.846e-23
Identity = 49/105 (46.67%), Postives = 75/105 (71.43%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN+G +IP VG G W+    V  + +  AIK+GYR  D A+ Y NE+E+G  +K+  ++ +VKRE+L+ITSKLWN++H+ ++V  AL +TL DL +DY+DL+ +H
Sbjct:   12 LNSGYEIPLVGFGCWKLTNDVASDQIYRAIKSGYRLFDGAEDYANEQEVGEGIKRAIKEGIVKREELFITSKLWNSFHDKKNVEVALMKTLSDLNLDYVDLFYIH 116          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: GCY_YEAST (Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.846e-23
Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLW-NAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LNTGA+IP +GLGTWQS       AV  A+K GYRHID A IY NE ++G  +K    D+ V RE++++T+KLW   +HEPE    ALD++L+ L +DY+DLYLMH
Sbjct:   14 LNTGAQIPQIGLGTWQSKENDAYKAVLTALKDGYRHIDTAAIYRNEDQVGQAIK----DSGVPREEIFVTTKLWCTQHHEPE---VALDQSLKRLGLDYVDLYLMH 112          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: ALRB_DICDI (Aldose reductase B OS=Dictyostelium discoideum GN=alrB PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.410e-23
Identity = 56/116 (48.28%), Postives = 77/116 (66.38%), Query Frame = 1
Query:   85 KMANEIRHFVLNTGAKIPSVGLGTWQ-SDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            K+ ++I H        IP +GLGT+  +  G VG+AV  A+K+GYRHID A IY NEKEIG  LK+ F +  +KRED++  SKLWN+ H    V +  ++TL DL ++YLDLYL+H
Sbjct:    9 KLNDDIHH--------IPMIGLGTYNGAKVGEVGDAVKVALKSGYRHIDGAAIYMNEKEIGHALKEVFAEGEIKREDIFYVSKLWNSCHHASLVRKHCEKTLEDLGLEYLDLYLIH 116          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 7.013e-23
Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 1
Query:  106 HFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            HFVL +G  +P+VGLGTW++      +   A  +AGYRH+D A  YG EKE+G  LK   E A + R+DL++TSK+W     PE V  AL+ TL+DLQ+DY+DLY +H
Sbjct:   15 HFVLKSGHAMPAVGLGTWRAGSDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAME-AGIDRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIH 121          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AKC1H_RAT (Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus GN=Akr1c18 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.196e-22
Identity = 51/117 (43.59%), Postives = 76/117 (64.96%), Query Frame = 1
Query:   88 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            M ++I+   LN G  IP +G GT+ ++  +   ++ +   AI  G+RHIDC+ +Y NE+EIG  +    ED  VKRED++ TSKLW+  H PE V  +L+ +LR L +DY+DLYL+H
Sbjct:    1 MNSKIQKMELNDGHSIPVLGFGTYATEENLRKKSMESTKIAIDVGFRHIDCSHLYQNEEEIGQAIVSKIEDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIH 117          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.481e-22
Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN+G  +P VG G W+ D  V  + V  AIKAGYR  D A  YGNEKE G  + +  +D +VKREDL+I SKLW  +H+ + V     R L D QIDY DL+L+H
Sbjct:    8 LNSGYDMPQVGFGLWKVDNAVCADTVYNAIKAGYRLFDGACDYGNEKECGEGVARAIKDGLVKREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVH 112          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: CRO_RANTE (Rho crystallin OS=Rana temporaria PE=2 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 3.481e-22
Identity = 54/108 (50.00%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSD---PGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN G  +P +GLGT+ S      +   AV  AI  GYRHIDCA I GNE  IG  ++    D  VKRED++ T KLW  Y  PE V + L+R+LRD+ +DYLDL+LMH
Sbjct:   11 LNDGNMMPILGLGTYASPHVPKSLAEEAVKIAIDVGYRHIDCAFITGNEMHIGNGIRSKISDGTVKREDIFYTGKLWCTYFSPEMVRKGLERSLRDVGMDYLDLFLMH 118          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AKCL2_MACFA (1,5-anhydro-D-fructose reductase OS=Macaca fascicularis GN=AKR1E2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.481e-22
Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 1
Query:  133 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            IP+VGL  W++ PG V  AV  AI AGYRH +CA  Y NEKE+G  ++   ++  V+REDL+I SKLW   H+   V  A  R+L+ L+++YLDLYL+H
Sbjct:    4 IPAVGLSCWKASPGKVTEAVKVAIDAGYRHFNCAYFYHNEKEVGAGIRYKIKEGAVRREDLFIASKLWCTCHKKSLVKTACRRSLKALKLNYLDLYLIH 102          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.754e-22
Identity = 54/105 (51.43%), Postives = 73/105 (69.52%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LNTGA IP +G GTW+S      ++V AA+KAGYRHID A IY NE+E+G  +K    D+ V RE+++IT+KLW    E  D   AL+++L+ L +DY+DLYLMH
Sbjct:   14 LNTGASIPVLGFGTWRSVDNNGYHSVIAALKAGYRHIDAAAIYLNEEEVGRAIK----DSGVPREEIFITTKLWGT--EQRDPEAALNKSLKRLGLDYVDLYLMH 112          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AKCL2_HUMAN (1,5-anhydro-D-fructose reductase OS=Homo sapiens GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.013e-21
Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 1
Query:  133 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            IP+VGL +W++ PG V  AV  AI AGYRH DCA  Y NE+E+G  ++   ++  V+REDL+I +KLW   H+   V  A  ++L+ L+++YLDLYL+H
Sbjct:    4 IPAVGLSSWKASPGKVTEAVKEAIDAGYRHFDCAYFYHNEREVGAGIRCKIKEGAVRREDLFIATKLWCTCHKKSLVETACRKSLKALKLNYLDLYLIH 102          
The following BLAST results are available for this feature:
BLAST of CF503840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
XYL1_CANPA1.846e-2346.67NADH-dependent D-xylose reductase OS=Candida parap... [more]
GCY_YEAST1.846e-2352.83Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE... [more]
ALRB_DICDI2.410e-2348.28Aldose reductase B OS=Dictyostelium discoideum GN=... [more]
ALDR_HORVU7.013e-2349.07Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
AKC1H_RAT1.196e-2243.59Aldo-keto reductase family 1 member C18 OS=Rattus ... [more]
XYL1_TRIRE3.481e-2249.52NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
CRO_RANTE3.481e-2250.00Rho crystallin OS=Rana temporaria PE=2 SV=3[more]
AKCL2_MACFA3.481e-2249.491,5-anhydro-D-fructose reductase OS=Macaca fascicu... [more]
YPR1_YEAST7.754e-2251.43Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
AKCL2_HUMAN1.013e-2147.471,5-anhydro-D-fructose reductase OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-327 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503840 ID=CF503840; Name=CF503840; organism=Citrus sinensis; type=EST; length=430bp
GCCGGTGCCTGCTTTTACCTCTGGTCCACTCATTCGCTCACGCTTTTTTG
CTCATTGCTCTCTCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGA
TTCGACACTTCGTGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTA
GGCACGTGGCAGTCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGC
CATCAAGGCTGGATACCGACATATTGATTGTGCTCAAATTTACGGCAATG
AAAAGGAGATTGGTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTC
AAGCGTGAGGATTTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGA
ACCAGAAGATGTACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGA
TTGACTACCTTGATCTATACCTTATGCACT
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