CF503840

Overview
NameCF503840
Unique NameCF503840
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length430
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: S6PD_MALDO (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.573e-21
Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            L++G ++P +GLG W+ +   +   +  AIK GYRH DCA  Y +E ++G  L + F+  +VKRE+L+IT+K+WN+ H    V EA   +L  LQIDYLDLYL+H
Sbjct:    6 LSSGYEMPVIGLGLWRLEKDELKEVILNAIKIGYRHFDCAAHYKSEADVGEALAEAFKTGLVKREELFITTKIWNSDH--GHVVEACKNSLEKLQIDYLDLYLVH 108          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1C3_PONAB (Aldo-keto reductase family 1 member C3 homolog OS=Pongo abelii GN=AKR1C3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.573e-21
Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN G  +P +G GT+         A+     AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW+ +H PE V  AL+ +L+  Q+DY+DLYL+H
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIH 117          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1C3_HUMAN (Aldo-keto reductase family 1 member C3 OS=Homo sapiens GN=AKR1C3 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 8.573e-21
Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN G  +P +G GT+         A+     AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW+ +H PE V  AL+ +L+  Q+DY+DLYL+H
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIH 117          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.573e-21
Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN    +P +G GT+         A+ A   AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW   H PE V  AL+R+L++LQ+DY+DLYL+H
Sbjct:   10 LNDSHFMPVLGFGTYAPPEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLVH 117          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1CO_HORSE (Aldo-keto reductase family 1 member C23-like protein OS=Equus caballus GN=PGFS PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.462e-20
Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN G  IP +G GT+  +       V     AI AG+RHID A  Y NEKE+G  ++   ED  VKRED++ TSKLW  +  PE V  AL+++L +LQ+DY+DLY++H
Sbjct:   10 LNDGHVIPVLGFGTYAPEEVPKSRTVEVTKLAIDAGFRHIDSAYSYNNEKEVGQAIRSKIEDGTVKREDIFYTSKLWLTFLRPELVRPALEKSLTNLQLDYVDLYIIH 117          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFA (Aldo-keto reductase family 1 member C4 OS=Macaca fascicularis GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.910e-20
Identity = 51/118 (43.22%), Postives = 75/118 (63.56%), Query Frame = 1
Query:   88 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAA----AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            M  + +   LN G  +P +G GT+ + P V  N V      AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW  +  P+ V  AL+ +L+ LQ+DY+DLYL+H
Sbjct:    1 MDPKYQRVALNDGHFMPVLGFGTY-APPEVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIH 117          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1C4_HUMAN (Aldo-keto reductase family 1 member C4 OS=Homo sapiens GN=AKR1C4 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.494e-20
Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSDPGVVGNAVAA----AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            LN G  +P +G GT+ + P V  N        AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW  + +P+ V  AL+ +L+ LQ+DY+DLYL+H
Sbjct:   10 LNDGHFMPVLGFGTY-APPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLH 117          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFU (Aldo-keto reductase family 1 member C4 OS=Macaca fuscata fuscata GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.557e-20
Identity = 50/118 (42.37%), Postives = 75/118 (63.56%), Query Frame = 1
Query:   88 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAA----AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            M  + +   LN G  +P +G G++ + P V  N V      AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW  +  P+ V  AL+ +L+ LQ+DY+DLYL+H
Sbjct:    1 MDPKYQRVALNDGHFMPVLGFGSY-APPEVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIH 117          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.238e-19
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  121 TGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMH 429
            TG K+P  G G W+ D       V  AIK GYR  D A  YGNE E+G  + K   + +VKREDL+I +KLWN +H  + V    DR L+D  ++Y DLYL+H
Sbjct:   11 TGDKMPIRGFGCWKIDTKDCEETVYQAIKTGYRLFDGACDYGNEVEVGRGINKAINEGLVKREDLFIVTKLWNTFHSKKHVRALFDRQLKDTGLEYFDLYLIH 113          
BLAST of CF503840 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.617e-19
Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  115 LNTGAKIPSVGLGTWQSD---PGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLM 426
            L+ G  IP +GLGT+      PG    AV  AI  GYRHID A +Y NE E+G  +++   +  VKRE+++   KLWN  H P  V  AL+RTL+ L++DY+DLY++
Sbjct:   12 LSDGNNIPLIGLGTYSDPRPVPGKTYVAVKTAIDEGYRHIDGAYVYHNEHEVGEAIREKIAEGKVKREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYII 118          
The following BLAST results are available for this feature:
BLAST of CF503840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
S6PD_MALDO8.573e-2145.71NADP-dependent D-sorbitol-6-phosphate dehydrogenas... [more]
AK1C3_PONAB8.573e-2144.44Aldo-keto reductase family 1 member C3 homolog OS=... [more]
AK1C3_HUMAN8.573e-2144.44Aldo-keto reductase family 1 member C3 OS=Homo sap... [more]
AK1C1_PONAB8.573e-2146.30Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1CO_HORSE1.462e-2046.30Aldo-keto reductase family 1 member C23-like prote... [more]
AK1C4_MACFA1.910e-2043.22Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
AK1C4_HUMAN2.494e-2044.95Aldo-keto reductase family 1 member C4 OS=Homo sap... [more]
AK1C4_MACFU5.557e-2042.37Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
DTDH_MUCMU1.238e-1945.634-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
AK1D1_MOUSE1.617e-1944.863-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-327 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503840 ID=CF503840; Name=CF503840; organism=Citrus sinensis; type=EST; length=430bp
GCCGGTGCCTGCTTTTACCTCTGGTCCACTCATTCGCTCACGCTTTTTTG
CTCATTGCTCTCTCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGA
TTCGACACTTCGTGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTA
GGCACGTGGCAGTCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGC
CATCAAGGCTGGATACCGACATATTGATTGTGCTCAAATTTACGGCAATG
AAAAGGAGATTGGTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTC
AAGCGTGAGGATTTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGA
ACCAGAAGATGTACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGA
TTGACTACCTTGATCTATACCTTATGCACT
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