CF503857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.066e-20 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 9 REILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGH 326 REI+ Q GQCGNQIG +FW+ +C EHG++P G V +R +V++ +A YVPRAVL+DLEP ++ I+ Y ++ P+N + GAGNNW +G+ Sbjct: 3 REIITCQVGQCGNQIGMEFWKQLCMEHGINPEGILEDFAVNG--EDRKDVFFYQADDEHYVPRAVLIDLEPRVINCIQKSTYSSLYNPENIYIAKHGGGAGNNWGRGY 108
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.066e-20 Identity = 42/107 (39.25%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ I GQ G QIG+ WE+ EHG+ P G+ D + + +++E S G+YVPR++ +DLEP +D +R+GPY +F P+ + G+ A +N+A+GH Sbjct: 1 MREVVSIHVGQAGVQIGNACWELYTIEHGLSPDGRLSDDSPSKHD-DGFSTFFSETSSGKYVPRSLYVDLEPNVIDEVRNGPYRSLFHPETMITGKEDAASNYARGH 106
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA8_RAT (Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.066e-20 Identity = 41/107 (38.32%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE + + GQ G QIG+ WE+ C EHG+ G + + + +++E G++VPRAV++DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GH Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA8_MOUSE (Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.066e-20 Identity = 41/107 (38.32%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE + + GQ G QIG+ WE+ C EHG+ G + + + +++E G++VPRAV++DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GH Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBBP_DROME (Probable tubulin beta chain CG32396 OS=Drosophila melanogaster GN=CG32396 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.004e-20 Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVD-PTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+ +Q G GN IG FW VI EHGVD +G++ G LQLERINV++N + R+ R +L+D E T+ + + Q++RP+NFV G AGNN+A+G+ Sbjct: 1 MREIVTLQIGGAGNAIGDSFWHVISHEHGVDYASGRF--GGTSPLQLERINVFFNATASKRFYARTILIDTEASTIQRLNAS--SQLYRPENFVAGSESAGNNFARGY 104
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA2_STYLE (Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.004e-20 Identity = 41/107 (38.32%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ I GQ G Q+G+ WE+ C EHG+ P G+ + + N +++E G++VPR V +DL P +D +R+G Y Q+F P+ + G+ A NN+A+GH Sbjct: 1 MREVISIHVGQAGIQVGNACWELFCLEHGIQPDGQMPSNKTIGGGDDAFNTFFSETGTGKHVPRCVFLDLGPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 4.004e-20 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASG--------GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ + GQ G QIG+ WE+ C EHG+ P G E+ ++ + N Y N+ G G++VPR++ +DLEP +D +R+GPY +F P+ V G+ A NN+A+GH Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGF----PTENSEVHKNNSYLNDGFGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGH 111
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 5.229e-20 Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 3 Query: 12 EILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQ--SGAGNNWAKG 323 EI+ +Q GQCGNQIG +FW+ +C EHG+ P G D D Q +R +V++ +A Y+PRAVL+DLEP +++I + PY +++ +N + GAGNNWA G Sbjct: 4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLE-DFATDGQ-DRKDVFFYQADDNHYIPRAVLIDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 5.229e-20 Identity = 40/107 (37.38%), Postives = 64/107 (59.81%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ + GQ G QI + WE+ C EHG+ P G + ++ + +++E G+YVPR + DLEP +D +R+G Y +F P+N + G+ A NN+A+GH Sbjct: 1 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKKEDPDHGFSTFFSETGQGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPENLITGKEDASNNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.829e-20 Identity = 44/109 (40.37%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQ--LERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ I GQ G QIG+ WE+ EHG+ P G Y +G++ + E + +++E G+YVPRA+ +DLEP +D +R+G Y +F P+ + G+ A NN+A+GH Sbjct: 1 MREVISINVGQAGCQIGNACWELYSQEHGIRPDG-YLQEGLDRPKGGEEGFSTFFSETGSGKYVPRALYVDLEPNVIDEVRTGVYKDLFHPEQLIAGKEDAANNYARGH 108 The following BLAST results are available for this feature:
BLAST of CF503857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 402
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503857 ID=CF503857; Name=CF503857; organism=Citrus sinensis; type=EST; length=328bpback to top |