CF503860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.417e-38 Identity = 70/110 (63.64%), Postives = 94/110 (85.45%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMI R L T IK+ VLDE+DEMLSRGFKDQIY+V+R +P D+QVVL+SAT+P E+L++T +FM +P++ILVK+DELTLEGI+QF++ V+++EWKFD LCDLY+ + Sbjct: 157 RVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVV 266
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.230e-37 Identity = 71/110 (64.55%), Postives = 95/110 (86.36%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L ++QVVL+SAT+P ++LE+T KFM +P++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+TL Sbjct: 162 RVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.740e-37 Identity = 75/112 (66.96%), Postives = 94/112 (83.93%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMIKR+ + TR +++LVLDE+DE+LS GFK QIYD++ LP QVV++SAT+ EILE+T KFM DPVKILVKRDE+TLEGIKQ++V VE+EEWKFDTLCD+YD+L Sbjct: 152 RVLDMIKRRLIETRHVQILVLDEADELLSDTLGFKHQIYDIFTKLPRTSQVVVVSATMSPEILEITKKFMNDPVKILVKRDEITLEGIKQYYVNVEKEEWKFDTLCDIYDSL 263
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.578e-37 Identity = 69/110 (62.73%), Postives = 95/110 (86.36%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMI+R+ RT +K+ ++DE+DEMLS GFK+QIY+++R LP QVVL+SAT+P ++LE+TTKFM +PV+ILVK+DELTLEGIKQF++ VE+E++KFD LCDLYD++ Sbjct: 150 RVFDMIERRFFRTDKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVEQEDFKFDCLCDLYDSI 259
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.578e-37 Identity = 69/110 (62.73%), Postives = 95/110 (86.36%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMI+R+ +T +K+ +LDE+DEMLS GFK+QIY+++R LP QVVL+SAT+P ++LE+TTKFM +PV+ILVK+DELTLEGIKQF++ VE+E++KFD LCDLYD++ Sbjct: 151 RVFDMIERRFFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVEQEDYKFDCLCDLYDSI 260
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.673e-37 Identity = 74/110 (67.27%), Postives = 94/110 (85.45%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV D+IKR LRT ++++LVLDE+DEMLS+GF DQIY+++R+LP D+QV L SAT+P E+LE+T KFM DPV+ILVKR+ LTLEGIKQFF+AVE EE K DTL DLY+T+ Sbjct: 157 RVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETV 265
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.673e-37 Identity = 74/110 (67.27%), Postives = 94/110 (85.45%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV D+IKR LRT ++++LVLDE+DEMLS+GF DQIY+++R+LP D+QV L SAT+P E+LE+T KFM DPV+ILVKR+ LTLEGIKQFF+AVE EE K DTL DLY+T+ Sbjct: 157 RVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETV 265
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 4.673e-37 Identity = 74/110 (67.27%), Postives = 94/110 (85.45%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV D+IKR LRT ++++LVLDE+DEMLS+GF DQIY+++R+LP D+QV L SAT+P E+LE+T KFM DPV+ILVKR+ LTLEGIKQFF+AVE EE K DTL DLY+T+ Sbjct: 157 RVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRILVKRESLTLEGIKQFFIAVE-EEHKLDTLMDLYETV 265
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.673e-37 Identity = 71/110 (64.55%), Postives = 93/110 (84.55%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DM+ R+ L + IK+ VLDE+D MLSRGFKDQIY++++ L +QVVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+TL Sbjct: 163 RVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 272
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.972e-37 Identity = 68/110 (61.82%), Postives = 94/110 (85.45%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMI+R+ +T +K+ ++DE+DEMLS GFK+QIY+++R LP QVVL+SAT+P ++LE+TTKFM +PV+ILVK+DELTLEGIKQF++ VE E++KFD LCDLYD++ Sbjct: 151 RVFDMIERRYFKTEKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSI 260 The following BLAST results are available for this feature:
BLAST of CF503860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503860 ID=CF503860; Name=CF503860; organism=Citrus sinensis; type=EST; length=333bpback to top |