CF503863

Overview
NameCF503863
Unique NameCF503863
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length414
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2010 contig Csv1_Contig2010:48..461. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL10_ARATH (GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana GN=At1g28610 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.742e-13
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  112 AVYNFGDSNSDTGGISAAMTQ--VPP----PNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSI-------RPGGFSP---FHLGIQISQF 405
            ++ +FGDS +DTG +     +  +P     P GE+FF HP+GR C+GR+IID IAE + LP++ P+  S   NF  G NFA  G++        + G + P     LGIQ+  F
Sbjct:   31 SIISFGDSITDTGNLVGLSDRNHLPVTAFLPYGETFFHHPTGRSCNGRIIIDFIAEFLGLPHVPPFYGSKNGNFEKGVNFAVAGATALETSILEKRGIYYPHSNISLGIQLKTF 144          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL91_ARATH (GDSL esterase/lipase At1g28640 OS=Arabidopsis thaliana GN=At1g28640 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.361e-12
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGIS--AAMTQVPP----PNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 351
            F ++ +FGDS +DTG     + +  +P     P GESFF  PSGR+ DGRLIID IAE + LPY+  Y  S   +F  G NFA  G++
Sbjct:   33 FKSIISFGDSIADTGNYLHLSDVNHLPQSAFLPYGESFFHPPSGRYSDGRLIIDFIAEFLGLPYVPSYFGSQNVSFDQGINFAVYGAT 120          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL13_ARATH (GDSL esterase/lipase At1g28670 OS=Arabidopsis thaliana GN=At1g28670 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.361e-12
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGIS--AAMTQVPP----PNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 351
            F ++ +FGDS +DTG     + +  +P     P GESFF  PSGR  +GRLIID IAE + LPY+ PY  S   +F  G NFA  G++
Sbjct:   33 FKSIISFGDSIADTGNYLHLSDVNHLPQSAFLPYGESFFHPPSGRASNGRLIIDFIAEFLGLPYVPPYFGSQNVSFEQGINFAVYGAT 120          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL57_ARATH (GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana GN=At3g48460 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11
Identity = 38/95 (40.00%), Postives = 50/95 (52.63%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGISAAMTQV------PPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFR------NGANFATGGSSI 354
            F  +Y FGDS +DTG   +            PP G +FF  P+ R+ DGRL ID +AE + LP+L PYL    TN        +G NFA  GS++
Sbjct:   36 FNKIYAFGDSFTDTGNSRSGEGPAGFGHLSSPPYGMTFFRRPTNRYSDGRLTIDFVAESMNLPFLPPYLSLKTTNANGTATDTHGVNFAVSGSTV 130          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.753e-11
Identity = 37/92 (40.22%), Postives = 50/92 (54.35%), Query Frame = 1
Query:  109 PAVYNFGDSNSDTGGI----SAAMTQVPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLD------SVGTNFRNGANFATGGSSI 354
            PA++ FGDS  D G      +       PP G SFF  P+GRF +GR + D I+E V LP   P+L+      +  +NF NG NFA+ GS +
Sbjct:   30 PAIFTFGDSIFDAGNNHYNKNCTAQADFPPYGSSFFHRPTGRFTNGRTVADFISEFVGLPLQKPFLELQIQILNGTSNFSNGINFASAGSGL 121          
The following BLAST results are available for this feature:
BLAST of CF503863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GDL10_ARATH2.742e-1338.60GDSL esterase/lipase At1g28610 OS=Arabidopsis thal... [more]
GDL91_ARATH1.361e-1245.45GDSL esterase/lipase At1g28640 OS=Arabidopsis thal... [more]
GDL13_ARATH1.361e-1245.45GDSL esterase/lipase At1g28670 OS=Arabidopsis thal... [more]
GDL57_ARATH1.152e-1140.00GDSL esterase/lipase At3g48460 OS=Arabidopsis thal... [more]
GLIP6_ARATH9.753e-1140.22GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-350 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503863 ID=CF503863; Name=CF503863; organism=Citrus sinensis; type=EST; length=414bp
GAGCCTGTCGATATAAGGTTATTTTATGCATACCTGCTTCCCATCTTTGC
GTTCATGGGAGGACCAATGGCAACAATGGGTGGCGCCAGTTTAAAGGGAT
GTGGGTTCCCCGCTGTGTACAATTTCGGTGACTCAAATTCAGACACCGGA
GGAATCTCAGCTGCAATGACGCAAGTTCCTCCACCAAATGGTGAATCTTT
CTTTGGACACCCATCAGGAAGATTTTGTGACGGCCGTCTCATCATTGATT
TAATTGCTGAGAAAGTGAAGTTGCCATATCTGAGTCCGTACCTGGATTCA
GTGGGCACAAATTTCAGGAATGGTGCCAATTTTGCAACTGGAGGGTCATC
TATTCGACCTGGTGGCTTTAGTCCATTCCATCTTGGCATTCAAATTTCCC
AATTTATACAATTC
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