CF503877

Overview
NameCF503877
Unique NameCF503877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length303
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.550e-22
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA   DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 77
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.550e-22
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANL-DVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EM++ M+KVA   DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    6 REENVYLAKLAEQAERYEEMIEFMEKVAKTADVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 75
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.248e-22
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 78
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.248e-22
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVAN-LDV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA  +D  ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    5 REENVYLAKLAEQAERYEEMVEFMEKVAKTVDTDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 74
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.248e-22
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 78
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.248e-22
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 78
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.248e-22
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 77
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.248e-22
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 77
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.466e-22
Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVAN-LDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA  +DVE L+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    4 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 73
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14332_ENTHI (14-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.466e-22
Identity = 47/68 (69.12%), Postives = 61/68 (89.71%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE+ VY++KLAEQ+ERY+EMV  MK+VA +  EL+VEERNL+SV YKNV+G+RRASWRI+SS+EQKE+
Sbjct:    4 REDLVYLSKLAEQSERYEEMVQYMKQVAEMGTELSVEERNLISVAYKNVVGSRRASWRIISSLEQKEQ 71
The following BLAST results are available for this feature:
BLAST of CF503877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433A_HORVU5.550e-2281.4314-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14334_SOLLC5.550e-2280.0014-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
1433B_HORVU7.248e-2278.5714-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14337_ARATH7.248e-2280.0014-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14335_ORYSJ7.248e-2278.5714-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14332_ORYSJ7.248e-2278.5714-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
14332_MAIZE7.248e-2278.5714-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
14331_MAIZE7.248e-2278.5714-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
14333_ARATH9.466e-2280.0014-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14332_ENTHI9.466e-2269.1214-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-364 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503877 ID=CF503877; Name=CF503877; organism=Citrus sinensis; type=EST; length=303bp
ATCTTCTCCTCTCCTTCTGAGTTCTCAGTTCTCAGTTCTCAGTTCTCACA
TTACAGTACTGCTTGTAAAAGCAAAAGATTCGCCATGGACAAAGATCCGT
GAAAACTTCGTTTACATCGCCAAGCTTGCTGAACAAGCTGAACGATACGA
CGAAATGGTTGATGCAATGAAAAAGGTAGCGAATCTTGACGTGGAACTGA
CTGTGGAGGAGAGAAACTTACTCTCGGTTGGGTATAAGAATGTGATTGGT
GCACGTAGAGCATCATGGAGGATTCTTTCGTCGATAGAGCAGAAAGAAGA
GGC
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