CF503877

Overview
NameCF503877
Unique NameCF503877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length303
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9428 contig Csv1_Contig9428:70..370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.236e-21
Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA +    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    7 REENVYMAKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 76          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.615e-21
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KVA      ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKE+
Sbjct:    7 REENVYLAKLAEQAERYEEMVEFMEKVAKTVETEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKED 76          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.109e-21
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKV--ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KV  A    ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    8 REENVYLAKLAEQAERYEEMVEFMEKVCAAADSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 77          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.109e-21
Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKV---ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KV   A+   ELT+EERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    8 REENVYLAKLAEQAERYEEMVEFMEKVVAAADGGEELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEE 78          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.754e-21
Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKV---ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KV   A+   ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 75          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.754e-21
Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKV---ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KV   A+   ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 75          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.754e-21
Identity = 54/73 (73.97%), Postives = 59/73 (80.82%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDV-----ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV+ M+KV          ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:   10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEE 82          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.597e-21
Identity = 54/71 (76.06%), Postives = 59/71 (83.10%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVAN---LDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  VY+AKLAEQAERY+EMV  M+KV+       ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    3 REENVYMAKLAEQAERYEEMVSFMEKVSTSLGTSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 73          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.597e-21
Identity = 56/80 (70.00%), Postives = 61/80 (76.25%), Query Frame = 2
Query:   80 SPWTKIRENFVYIAKLAEQAERYDEMVDAMKKVANL------DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            SP    RE  VY AKLAEQAERY+EMV+ M++VA          ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE
Sbjct:    2 SPAEPTREESVYKAKLAEQAERYEEMVEYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 81          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.597e-21
Identity = 48/67 (71.64%), Postives = 61/67 (91.04%), Query Frame = 2
Query:  101 ENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            E+ V+++KLAEQ+ERYDEMV  MK+VA L+ EL+VEERNLLSV YKNVIG+RRASWRI++S+EQKE+
Sbjct:    2 EDCVFLSKLAEQSERYDEMVQYMKQVAALNTELSVEERNLLSVAYKNVIGSRRASWRIITSLEQKEQ 68          
The following BLAST results are available for this feature:
BLAST of CF503877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433_MESCR1.236e-2177.1414-3-3-like protein OS=Mesembryanthemum crystallin... [more]
14335_ARATH1.615e-2177.1414-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
1433_OENEH2.109e-2178.5714-3-3-like protein OS=Oenothera elata subsp. hook... [more]
1433_HELAN2.109e-2176.0614-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
14336_SOLLC2.754e-2177.4614-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU2.754e-2177.4614-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
14331_ORYSJ2.754e-2173.9714-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
1433B_TOBAC3.597e-2176.0614-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
14334_ORYSJ3.597e-2170.0014-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
14333_ENTHI3.597e-2171.6414-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-364 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503877 ID=CF503877; Name=CF503877; organism=Citrus sinensis; type=EST; length=303bp
ATCTTCTCCTCTCCTTCTGAGTTCTCAGTTCTCAGTTCTCAGTTCTCACA
TTACAGTACTGCTTGTAAAAGCAAAAGATTCGCCATGGACAAAGATCCGT
GAAAACTTCGTTTACATCGCCAAGCTTGCTGAACAAGCTGAACGATACGA
CGAAATGGTTGATGCAATGAAAAAGGTAGCGAATCTTGACGTGGAACTGA
CTGTGGAGGAGAGAAACTTACTCTCGGTTGGGTATAAGAATGTGATTGGT
GCACGTAGAGCATCATGGAGGATTCTTTCGTCGATAGAGCAGAAAGAAGA
GGC
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