CF503877

Overview
NameCF503877
Unique NameCF503877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length303
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9428 contig Csv1_Contig9428:70..370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 143B2_DANRE (14-3-3 protein beta/alpha-2 OS=Danio rerio GN=ywhab2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.182e-18
Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            + + V  AKLAEQAERYD+M  AMK V    VEL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E
Sbjct:    3 KSDLVQKAKLAEQAERYDDMAAAMKAVTEGGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE 70
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.182e-18
Identity = 49/71 (69.01%), Postives = 56/71 (78.87%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDV---ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            RE  +Y+AKLAEQAERY+EMV  M K+        ELTVEERNLLSV YKNVIG+ RA+WRI+SSIEQKEE
Sbjct:   11 REQCLYLAKLAEQAERYEEMVQFMDKLVLNSTPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE 81
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 143G2_ONCMY (14-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            RE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK
Sbjct:    4 REQLVQKARLAEQAERYDDMAAAMKSVTELNEALSNEERNLLSVAYKNVVGARRSSWRVISSIEQK 69
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 143G1_ONCMY (14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            RE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK
Sbjct:    4 REQLVQKARLAEQAERYDDMAAAMKSVTELNEALSNEERNLLSVAYKNVVGARRSSWRVISSIEQK 69
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 143G1_DANRE (14-3-3 protein gamma-1 OS=Danio rerio GN=ywhag1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            RE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK
Sbjct:    4 REQLVQKARLAEQAERYDDMAAAMKSVTELNEALSNEERNLLSVAYKNVVGARRSSWRVISSIEQK 69
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433G_RAT (14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            RE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK
Sbjct:    4 REQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQK 69
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433G_PONAB (14-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            RE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK
Sbjct:    4 REQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQK 69
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433G_MOUSE (14-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            RE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK
Sbjct:    4 REQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQK 69
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433G_HUMAN (14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            RE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK
Sbjct:    4 REQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQK 69
[Close]
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433G_CHICK (14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.850e-18
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            RE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK
Sbjct:    4 REQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQK 69
The following BLAST results are available for this feature:
BLAST of CF503877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
143B2_DANRE2.182e-1867.6514-3-3 protein beta/alpha-2 OS=Danio rerio GN=ywha... [more]
14310_SOLLC2.182e-1869.0114-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
143G2_ONCMY2.850e-1868.1814-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2... [more]
143G1_ONCMY2.850e-1868.1814-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2... [more]
143G1_DANRE2.850e-1868.1814-3-3 protein gamma-1 OS=Danio rerio GN=ywhag1 PE... [more]
1433G_RAT2.850e-1868.1814-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag... [more]
1433G_PONAB2.850e-1868.1814-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2... [more]
1433G_MOUSE2.850e-1868.1814-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1... [more]
1433G_HUMAN2.850e-1868.1814-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1... [more]
1433G_CHICK2.850e-1868.1814-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-364 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503877 ID=CF503877; Name=CF503877; organism=Citrus sinensis; type=EST; length=303bp
ATCTTCTCCTCTCCTTCTGAGTTCTCAGTTCTCAGTTCTCAGTTCTCACA
TTACAGTACTGCTTGTAAAAGCAAAAGATTCGCCATGGACAAAGATCCGT
GAAAACTTCGTTTACATCGCCAAGCTTGCTGAACAAGCTGAACGATACGA
CGAAATGGTTGATGCAATGAAAAAGGTAGCGAATCTTGACGTGGAACTGA
CTGTGGAGGAGAGAAACTTACTCTCGGTTGGGTATAAGAATGTGATTGGT
GCACGTAGAGCATCATGGAGGATTCTTTCGTCGATAGAGCAGAAAGAAGA
GGC
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