CF503878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPL (Chalcone synthase A (Fragment) OS=Ipomoea platensis GN=CHSA PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.343e-30 Identity = 63/122 (51.64%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 3 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 E+T FRGP+ D+L+ Q LF P +E PL++LVS++QTI+PD+D + HL E+GLTFH K VP LI++N+E L +AF P GISDWNSIFWI HPGG AILD+V Sbjct: 196 EVTLSVFRGPSLQQEDNLLAQCLFGDGSAAVIVGTDPRPGLETPLFELVSSAQTIIPDTDSHLKLHLLEMGLTFHCSKAVPSLITQNVEDCLVKAFEPFGISDWNSIFWILHPGGNAILDRV 317
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.762e-28 Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 3 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 E+ FRGP+ D L+ Q LF P +E PL++LVS +QT +PD+D + HLRE+GLTFH K VP LI++N+E L +AF P GISDWNSIFWI HPGG AILD+V Sbjct: 195 EVMLNVFRGPSLEQEDYLLAQCLFGDGSAAVIVGTEPRPGLETPLFELVSAAQTTIPDTDSHLKLHLREMGLTFHCSKAVPSLITQNVEDYLVKAFEPFGISDWNSIFWILHPGGIAILDRV 316
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.301e-28 Identity = 60/122 (49.18%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 3 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 EIT FRGP+ D+L+ Q LF P +E PL++LVS++QTI+P++D + HLRE+GLTFH K VP ++++N+E L +AF P GISDWNSIFW+ HPGG AI+D+V Sbjct: 198 EITINIFRGPSLEQDDNLLAQCLFGDGAAAMIVAADPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSKAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRV 319
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.301e-28 Identity = 60/122 (49.18%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 3 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 EIT FRGP+ D+L+ Q LF P +E PL++LVS++QTI+P++D + HLRE+GLTFH K VP ++++N+E L +AF P GISDWNSIFW+ HPGG AI+D+V Sbjct: 198 EITINIFRGPSLEQDDNLLAQCLFGDGAAAMIVAADPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSKAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRV 319
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.127e-28 Identity = 62/122 (50.82%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 3 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 E+ FRGP+ D+L+ Q LF P +E PL++LVS +QT +PD+D + LRE+GLTFH K VP LI++NIE L +AF P GISDWNSIFWI HPGG AILD V Sbjct: 198 EVMLSVFRGPSLQQEDNLLAQCLFGDGSAAVIVGTEPRPGLETPLFELVSAAQTTIPDTDSYLKLQLREMGLTFHCSKAVPSLITQNIEDCLVKAFEPFGISDWNSIFWILHPGGNAILDGV 319
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.127e-28 Identity = 59/122 (48.36%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 3 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 EIT FRGP+ D+L+ Q LF P +E PL++LVS++QTI+P++D + HLRE+GLTFH + VP ++++N+E L +AF P GISDWNSIFW+ HPGG AI+D+V Sbjct: 196 EITINIFRGPSLEQDDNLLAQCLFGDGSAAMIVGKDPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRV 317
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 6.695e-28 Identity = 61/122 (50.00%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 3 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 E+ FRGP+ D+L+ Q LF P +E PL++LVS +QT +PD+D + LRE+GLTFH K VP LI++N+E L +AF P GISDWNSIFWI HPGG AILD V Sbjct: 198 EVMLSVFRGPSLQQEDNLLAQCLFGDGAAAVIVGTEPRPGLETPLFELVSAAQTTIPDTDSYLKLQLREMGLTFHCSKAVPSLITQNVEDCLVKAFEPFGISDWNSIFWILHPGGNAILDGV 319
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.948e-27 Identity = 58/121 (47.93%), Postives = 81/121 (66.94%), Query Frame = 3 Query: 6 ITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 IT FRGP+ D+L+ Q LF P +E PL++LVS++QTI+P++D + HLRE+GLTFH + VP ++++N+E L +AF P GISDWNSIFW+ HPGG AI+D+V Sbjct: 197 ITINIFRGPSLEQDDNLLAQCLFGDGSAAMIDGKDPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRV 317
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.323e-27 Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 3 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 E+ FRGP+ D+L+ Q LF P +E PL++L+S +QTI+PD+D + H+RE+GLTFH K VP I++N+E L +AF P GISDWNSIFW+ HPGG AI++ V Sbjct: 200 EVMLSVFRGPSLQQEDNLLAQCLFGDGSAAIIIGTDPRPGLETPLFELISAAQTIIPDTDSHLKLHVREMGLTFHCSKAVPTFITQNVEDCLVKAFEPYGISDWNSIFWVLHPGGNAIVEGV 321
BLAST of CF503878 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.340e-27 Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 3 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQV 368 E+ FRGP+ D+L+ Q LF P +E PL++L+S +QTI+P++D + H+RE+GLTFH K VP I++N+E L +AF P GISDWNSIFW+ HPGG AI+D V Sbjct: 198 EVMLSVFRGPSLQQEDNLLAQCLFGDGSAALIVGTDPRPGLETPLFELISAAQTIIPNTDSHLKLHVREMGLTFHCSKAVPTFITQNVEDCLVKAFEPYGISDWNSIFWVLHPGGNAIVDGV 319 The following BLAST results are available for this feature:
BLAST of CF503878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 144
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503878 ID=CF503878; Name=CF503878; organism=Citrus sinensis; type=EST; length=370bpback to top |