CF503890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDB_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=mmgC PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 65/180 (36.11%), Postives = 107/180 (59.44%), Query Frame = 1 Query: 154 QLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 Q+ ++ V FAR+ IAP A +++++ FP L K MG L GI P++ + +A+ EISR S +VG+ H+++ N ++ G+ QK KY+P L SG+H+GA A++EP++GSD ++ A + +G Y++NG+K++ TNG A + +A T G GI+AFI+ Sbjct: 7 QVMMRKMVRDFARKEIAPAAEIMEKTDEFP--FQLIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYFGNEEQKMKYIPNLASGDHLGAFALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHGISAFIV 184
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDC_BACSU (Probable acyl-CoA dehydrogenase yngJ OS=Bacillus subtilis GN=yngJ PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26 Identity = 68/180 (37.78%), Postives = 96/180 (53.33%), Query Frame = 1 Query: 154 QLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 Q +E V FA++ IAP A ++DQ+ FP +K MG L GI P+E + +A+EE+ +A GS GLSY A +L + L G+ QK +L L SG +G+ ++EPNAGSD G + KA Y+ING K W TN A+T++V A T K I + +I Sbjct: 9 QQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQT--FKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKNIISALI 186
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADS_MOUSE (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acads PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23 Identity = 58/187 (31.02%), Postives = 95/187 (50.80%), Query Frame = 1 Query: 133 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 S+ +T +++ FA + + P AA +D+ + FP K MG L + P+E + IA+EEISRA S G+ +++L + +++ GS QK +++ +G+ +G A+SEP GSD A +++NG K W TN A VV+A TD +KGI+AF++ Sbjct: 31 SVELPETHQMLRQTCRDFAEKELVPIAAQLDREHLFP--TAQVKKMGELGLLAMDVPEELSGAGLGYLAYSIALEEISRACASTGVIMSVNNSLYLGPILKFGSAQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLV 215
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDSB_MOUSE (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadsb PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 60/197 (30.46%), Postives = 108/197 (54.82%), Query Frame = 1 Query: 109 HSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 ++ AF+ L D+ ++ K++V +FA+E++AP +++D+++ + V + G F L GI + + +EE+++ SV L + + N +H S QK YLPKL++ E +G+ +SE AGSD MK +AD+ Y++NG+KMW ++ A+ +V+A D +G +GIT F++ Sbjct: 47 NAVAFAPLQTLTDE-EIMMKQTVKKFAQEHVAPLVSSMDENSKMEKSV----IQGLFQQGLMGIEVEAQYGGTEASFFCSVLVIEELAKVDASVALLCDIQNTIINNLFRKHASEEQKATYLPKLVT-EKLGSFCLSEAGAGSDSFAMKTRADKSGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCFLV 237
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADS_RAT (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acads PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 57/187 (30.48%), Postives = 95/187 (50.80%), Query Frame = 1 Query: 133 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 S+ +T +++ FA + + P AA +D+ + FP + K MG L + P+E + IA+EEISR S G+ +++L + +++ GS QK +++ +G+ +G A+SEP GSD A +++NG K W TN A VV+A TD +KGI+AF++ Sbjct: 31 SVELPETHQMLRQTCRDFAEKELVPIAAQLDKEHLFP--TSQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRGCASTGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLV 215
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADS_PONAB (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADS PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 60/187 (32.09%), Postives = 93/187 (49.73%), Query Frame = 1 Query: 133 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 S+ +T ++ FA + + P AA +D+ + FP K MG L + P+E + IAMEEISR S G+ +++L + +++ GS QK K++ SG+ +G A+SEP GSD A +++NG K W TN A VV+A TD +KGI+AF++ Sbjct: 31 SVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFP--AAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLV 215
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADS_BOVIN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADS PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 60/188 (31.91%), Postives = 98/188 (52.13%), Query Frame = 1 Query: 133 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDG-GYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 S+ +T +++ FA + + P AA +D+ + FP K MG L + P+E + IAMEEISR S G+ +++L + +++ G+ QK +++ SG+ +G A+SEP GSD G R DG ++++G K W TN A +VV+A TD +KGI+AF++ Sbjct: 31 SVELPETHQMLRQTCRDFAEKELFPIAAQVDKEHRFP--AAQVKKMGELGLMAMNVPEELSGAGLDYLAYSIAMEEISRGCASTGVIMSVNNSLYLGPILKFGTKEQKQQWVAPFTSGDKIGCFALSEPGNGSD-AGAAATTARADGDSWVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFLV 215
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADS_PIG (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADS PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 59/187 (31.55%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 133 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 S+ +T +++ FA + + P AA +D+ + FP+ K MG L + P+E + IAMEEISR S G+ ++ L + +++ GS QK +++ SG+ VG A+SEP GSD A ++++G K W TN A VV+A TD +KGI+AF++ Sbjct: 31 SVELPETYQMLRQTCRDFAEKELVPIAAQVDKEHRFPEAQV--KKMGELGLMAMDVPEELSGAGLDYLAYTIAMEEISRGCASTGVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSGDKVGCFALSEPGNGSDAGAAATTAQADHDSWVLSGTKAWITNAWEASAAVVFASTDRSLQNKGISAFLV 215
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: FADE_BACSU (Probable acyl-CoA dehydrogenase OS=Bacillus subtilis GN=fadE PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.694e-22 Identity = 67/186 (36.02%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 142 FDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 F D ++ + +++ P +I+ ++ F V L K G L G P+E + E+ SRA GS LSYGAH + +V GS QK KYLP L SGE + A A++EP +GSD +G K A + G Y++ G K W TN A VVYAK D G K +AFI+ Sbjct: 30 FTDEHKMIAKTTEDYIEQDVLPHIDDIE-NHQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRA-GSFSLSYGAHVGIGSLPIVFFGSEEQKKKYLPGLASGEKIAAYALTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVD---GDK-FSAFIV 209
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDSB_RAT (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadsb PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.131e-22 Identity = 62/187 (33.16%), Postives = 102/187 (54.55%), Query Frame = 1 Query: 142 FDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 F D + +++V +FA+E IAP + +D+++ + V + G F + GI + + +EE+++ SV L N IN+L R HG+ QK YLPKL++ E +G+ +SE AGSD +K +AD+ Y+ING+KMW +N A+ +V+A D +G +GIT F++ Sbjct: 57 FTDEDIMMQKAVKKFAQEQIAPLVSTMDENSKMEKSV----IQGLFQQGMMGIEVEAKYGGTEASFLCSVLVIEELAKVDASVALLCDIQ-NTVINKLFRKHGTEEQKATYLPKLVT-EKLGSFCLSEAGAGSDSFALKTRADKSGNYYVINGSKMWISNAEHAELFLVFANVDPPSGYRGITCFLV 237 The following BLAST results are available for this feature:
BLAST of CF503890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503890 ID=CF503890; Name=CF503890; organism=Citrus sinensis; type=EST; length=694bpback to top |