CF503890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADS_HUMAN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADS PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.131e-22 Identity = 59/187 (31.55%), Postives = 92/187 (49.20%), Query Frame = 1 Query: 133 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 S+ +T ++ FA + + P AA +D+ + FP K MG L + P+E + IAMEEISR S G+ +++L + +++ GS QK ++ SG+ +G A+SEP GSD A +++NG K W TN A VV+A TD +KGI+AF++ Sbjct: 31 SVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFP--AAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLV 215
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDSB_BOVIN (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADSB PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.007e-22 Identity = 61/186 (32.80%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 142 FDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 F D ++ K +V +FA+E +AP + +D+ + + V + G F L GI + + +EE+++ SV L + L + ++G+ QK YLPKL + E ++ +SE AGSD MK +AD+ YIING+KMW ++ +A VV A D AG KGIT F++ Sbjct: 57 FTDEEMMIKSAVKKFAQEQVAPFVSKMDEDSKMEKSV----IQGLFQQGLMGIEIDTKYGGTGASFFSSVLVIEELAKVDASVALVCDIQNTLINRMIGKYGTEEQKATYLPKLAT-EKASSICISETGAGSDSFAMKTRADKKGDYYIINGSKMWISSAEIAGLFVVMANADFSAGYKGITCFLV 237
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDSB_PONAB (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADSB PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21 Identity = 64/187 (34.22%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 142 FDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 F D ++ K SV +FA+E IAP + +D+++ + V + G F L GI E + +EE+++ SV + + N IN L+R HG+ QK YLP+L + E VG+ +SE AGSD +K +AD+ Y++NG+KMW ++ A +V A D G KGIT+F++ Sbjct: 57 FTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSV----IQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAV-FCEIQNTLINTLIRKHGTEEQKGTYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLV 237
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDSB_HUMAN (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADSB PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 64/187 (34.22%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 142 FDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 F D ++ K SV +FA+E IAP + +D+++ + V + G F L GI E + +EE+++ SV + + N IN L+R HG+ QK YLP+L + E VG+ +SE AGSD +K +AD+ Y++NG+KMW ++ A +V A D G KGIT+F++ Sbjct: 57 FTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSV----IQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAV-FCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLV 237
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADM_DROME (Probable medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 70/196 (35.71%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 124 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAH-SNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT--DIKA-GSKGITAFII 693 + TS + QLQ +E +F RE I P AA D+S +P + W+L G N H P + C++ EE+ A G G+ S L ++ G+ QK KYL +L+ V A ++EP AGSDV G+K +A++ ++ING KMW TNG VA V A+T D K SK T FI+ Sbjct: 31 NGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWEL-GLMNNH---IPADIGGLDLDVFTTCLSAEEL--AYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIV 220
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDS_MEGEL (Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera elsdenii PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 47/119 (39.50%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 340 HCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG-YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 + +A+EE+++ V ++ A +LC N + + G+ AQK+K+L L+ G +GA ++EPNAG+D G + A + D G Y +NG+K++ TNG A +V+A TD G+ GITAFI+ Sbjct: 72 YILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKGNHGITAFIL 190
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACAD9_HUMAN (Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo sapiens GN=ACAD9 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 71/217 (32.72%), Postives = 105/217 (48.39%), Query Frame = 1 Query: 70 RSLCASFFTKKQKHSAAFSSTSLLFDDTQL--QFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDG--GYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFII 693 R+ F K K F + D+ QF V +F E + R IDQ P D L KL + L G+ P+E + + EI GS+ ++ AH + + ++ G+ QK KYLPKL SGEH+ A ++EP +GSD ++ +A + YI+NG+K+W TNG +A V+AKT++ S G ITAFI+ Sbjct: 37 RAFAKELFLGKIKKKEVFPFPEVSQDELNEINQFLGPVEKFFTEEVDSR--KIDQEGKIP-DETLEKLK-SLGLFGLQVPEEYGGLGFSNTMYS-RLGEIISMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEV-VDSDGSVKDKITAFIV 247
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDSB_DICDI (Probable short/branched chain specific acyl-CoA dehydrogenase OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 61/189 (32.28%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 130 TSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRV-DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 T+L ++T L KE+V FA E + P +D+++ + L K + + NL GI IA+EE+++ ++ + + L N + R+GS Q++KYL L + VG+ +SE +GSD + +A R DG +++NG K W TN A +V A D G KGITAFI+ Sbjct: 33 TTLSEEETLL--KETVANFANEKVRPLVKVMDETSELNK--GLLKDLFDMNLMGIDISDSYGGANMNFMGSIIAIEELAKVDPAISVIVDVQNTLVNNCINRYGSIQQREKYLSMLATNT-VGSFCLSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFIVMANVDPSQGYKGITAFIV 216
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADL_MOUSE (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadl PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 52/179 (29.05%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 163 FKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS--KGITAFII 693 F+ESV +F +E + P +++ ++V W+ G L GI ++ + EE S G + HS++ + + +G+ Q +K++P++ +G+ +GA+AM+EP AGSD+ G++ A R +I+NG+K++ TNG ++ ++V A T+ +A S GI+ F++ Sbjct: 60 FRESVRKFFQEEVIPHHTEWEKAGEVSREV--WEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEE-QAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEKFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDWILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLV 235
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADL_HUMAN (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADL PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.149e-18 Identity = 51/179 (28.49%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 163 FKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS--KGITAFII 693 F++SV +F +E + P + +++ ++V W+ G L G+ + I EE + ++ S G + HS + ++ + HGS Q ++P++ +G+ +GA+AM+EP AGSD+ G+K A + +I+NG+K++ +NG ++ ++V A T+ +A S GI+ F++ Sbjct: 60 FRKSVRKFFQEEVIPHHSEWEKAGEVSREV--WEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCS-GPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHGISLFLV 235 The following BLAST results are available for this feature:
BLAST of CF503890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503890 ID=CF503890; Name=CF503890; organism=Citrus sinensis; type=EST; length=694bpback to top |