CF503890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: GCDH_DICDI (Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=gcdh PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 56/195 (28.72%), Postives = 95/195 (48.72%), Query Frame = 1 Query: 127 STSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVD-GGYIINGNKMWCTNGPVAQTLVVYAKTD--------IKAGSKGITA 684 S L + ++ ++ V +F ++ + PR + F +++ + G + G T P A+E++ S + S+L ++ + G+ AQK KYL L SG+ VG ++EPNAGSD GM+ +A + G Y++NG K W TN P+A VV+AK + ++ G KG++A Sbjct: 44 SLESLLTEEEVMIRDQVNKFCQDELMPRIQMAYRDEKFDREI--MREYGKMGMLGATIPAYGGVSHVAYGLMANAVEKVDSGYRS---AMSVQSSLVMHPINTFGTDAQKSKYLDGLASGDLVGCFGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGTKTWITNSPIADVFVVWAKVENGDIRGFVLEKGMKGLSA 233
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADM_MACFA (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADM PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 67/206 (32.52%), Postives = 97/206 (47.09%), Query Frame = 1 Query: 94 TKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFII 693 TK + S F + Q +F+ + +FARE I P AA D++ +P + W+L G N H PQ C+ EE+ A G G+ N L ++ G+ QK KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D +K T FI+ Sbjct: 25 TKADRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWEL-GLMNPH---IPQNCGGLGLGTFDACLISEEL--AYGCTGVQTAIEGNSLGQMPIIIAGNEQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKASWYFLLARSDPDPKAPANKAFTGFIV 224
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADL_PIG (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADL PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 53/179 (29.61%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 163 FKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS--KGITAFII 693 F+ESV +F +E + P A +++ ++ LW+ G L GI + I EE S G + HS++ + + +GS Q ++P++ +G+ +GA+AM+EP AGSD+ G++ A + +I+NG+K++ TNG ++ ++V A T+ +A S GI+ F++ Sbjct: 60 FRESVRKFFQEEVIPHHAEWEKAGEVSRE--LWEKAGKQGLLGINIAERHGGIGGDLYSAAIVWEE-QAYSNCTGPGFSLHSDIVMPYIANYGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKKDGSDWILNGSKVFITNGWLSDVVIVVAVTNREARSPAHGISLFLV 235
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADV_HUMAN (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADVL PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18 Identity = 56/189 (29.63%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 169 ESVGQFARENIAPRAANIDQSNSFPQDVNL-------WKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFII 693 E QF +E + P + ++ N ++ L W+ + G+ P E + +E + VG++ GAH ++ ++ G+ AQK+KYLPKL SGE V A ++EP++GSD ++ A G Y +NG+K+W +NG +A V+AKT + + G ITAF++ Sbjct: 96 EEQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVV 284
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADM_PANTR (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan troglodytes GN=ACADM PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18 Identity = 66/206 (32.04%), Postives = 97/206 (47.09%), Query Frame = 1 Query: 94 TKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFII 693 TK + S F + Q +F+ + +FARE I P AA D++ +P + W+L G N H P+ C+ EE+ A G G+ N L ++ G+ QK KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D +K T FI+ Sbjct: 25 TKANRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWEL-GLMNTH---IPENCGGLGLGTFDACLISEEL--AYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIV 224
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADM_HUMAN (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADM PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18 Identity = 66/206 (32.04%), Postives = 97/206 (47.09%), Query Frame = 1 Query: 94 TKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFII 693 TK + S F + Q +F+ + +FARE I P AA D++ +P + W+L G N H P+ C+ EE+ A G G+ N L ++ G+ QK KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D +K T FI+ Sbjct: 25 TKANRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWEL-GLMNTH---IPENCGGLGLGTFDACLISEEL--AYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIV 224
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACAD9_MOUSE (Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus musculus GN=Acad9 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18 Identity = 63/184 (34.24%), Postives = 96/184 (52.17%), Query Frame = 1 Query: 160 QFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDI--KAGSK--GITAFII 693 QF + +F E + R IDQ P D L KL + L GI P+E + + EI S+ ++ AH + + ++ G+ QK KYLPKL SGEH+ A ++EP +GSD ++ +A + +I+NG+K+W TNG +A V+AKT++ GSK +TAFI+ Sbjct: 73 QFVGPLEKFFTEEVDSR--KIDQEGKIPVDT-LEKLK-SLGLFGIQVPEEYGGLGLSNTMYA-RLGEIISLDASITVTLAAHQAIGLKGIILVGNDEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKMTAFIV 251
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADV_RAT (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadvl PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.015e-18 Identity = 66/219 (30.14%), Postives = 106/219 (48.40%), Query Frame = 1 Query: 67 ARSLCASFFTKKQKHSAAFSSTSLLFDDTQLQF-KESVGQFAR--ENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFII 693 ++S F + F S+L ++ Q QF KE VG AR E + A N + K +G F G+ P E + E + V ++ GAH ++ ++ +G+ AQK+KYLP++ SG+ + A ++EP++GSDV ++ A G Y +NG+K+W +NG +A V+AKT IK + G ITAF++ Sbjct: 70 SKSFAVGMFKGQLTTDQVFPYPSVL-NEGQTQFLKELVGPVARFFEEVNDPAKNDSLEKVEEDTLQGLKELGAF---GLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQKEKYLPRVASGQALAAFCLTEPSSGSDVASIRSSAVPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVV 284
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADM_BOVIN (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADM PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.015e-18 Identity = 65/196 (33.16%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 124 SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFII 693 S S F + Q +F+ + +FARE I P AA D++ +P + W+L G N H P+ C+ EE+ A G G+ +N L ++ G+ Q+ KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D SK T FI+ Sbjct: 35 SGFSFEFTEQQKEFQATARKFAREEIIPLAAEYDKTGEYPVPLIKRAWEL-GLMNTH---IPESCGGLGLGTFDSCLISEEL--AYGCTGVQTAIEANSLGQMPVIIAGNDQQQKKYLGRMTEEPLMCAYCVTEPVAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPASKAFTGFIV 224
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADL_RAT (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadl PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.015e-18 Identity = 51/179 (28.49%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 163 FKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS--KGITAFII 693 F+ESV +F +E + P +++ ++ LW+ G L GI ++ + EE S G + HS++ + + +G+ Q ++++P++ +G+ +GA+AM+EP AGSD+ G++ A R +I+NG+K++ TNG ++ ++V A T+ +A S GI+ F++ Sbjct: 60 FRESVRKFFQEEVIPYHEEWEKAGEVSRE--LWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEE-QAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEQFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDWILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLV 235 The following BLAST results are available for this feature:
BLAST of CF503890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503890 ID=CF503890; Name=CF503890; organism=Citrus sinensis; type=EST; length=694bpback to top |