CF503890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDP_MYCLE (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae GN=fadE25 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 58/178 (32.58%), Postives = 86/178 (48.31%), Query Frame = 1 Query: 160 QFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 + + ++ A + IAP AA++DQ FP++ FN I P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD G+ GI+AFI+ Sbjct: 21 ELRATIRALAEKEIAPHAADVDQRARFPEEALAALNASGFN--AIHVPEEYGGQGADSVAACIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISAFIV 195
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADV_BOVIN (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADVL PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 64/218 (29.36%), Postives = 100/218 (45.87%), Query Frame = 1 Query: 67 ARSLCASFFTKKQKHSAAFSSTSLLFDDTQLQFKESVGQFAR--ENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFII 693 ++S F + F S+L +D KE VG R E + A N + K +G F G+ P E + +E + VG+ GAH ++ ++ G+ AQK+KYLPKL SGE + A ++EP++GSD ++ A G Y +NG+K+W +NG +A V+AKT + + G ITAF++ Sbjct: 70 SKSFAVGTFKGQLTTDQVFPYPSVLNEDQTQFLKELVGPVTRFFEEVNDAAKNDMLERVEETTMQGLKELGAF---GLQVPNELGGVGLCNTQYARLVEIVGMYDLGVGIVLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETIAAFCLTEPSSGSDAASIRSSAVPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPVTDTATGAVKEKITAFVV 284
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADV_MOUSE (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadvl PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.563e-17 Identity = 62/218 (28.44%), Postives = 103/218 (47.25%), Query Frame = 1 Query: 67 ARSLCASFFTKKQKHSAAFSSTSLLFDDTQLQFKESVGQFAR--ENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFII 693 ++S F + F S+L ++ KE VG AR E + A N + K +G F G+ P E + E + V ++ GAH ++ ++ +G+ AQ++KYLP++ SG+ + A ++EP++GSDV ++ A G Y +NG+K+W +NG +A V+AKT IK + G ITAF++ Sbjct: 71 SKSFAVGMFKGQLTIDQVFPYPSVLSEEQAQFLKELVGPVARFFEEVNDPAKNDALEKVEDDTLQGLKELGAF---GLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQREKYLPRVASGQALAAFCLTEPSSGSDVASIRSSAIPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVV 285
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADM_PIG (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADM PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.563e-17 Identity = 69/215 (32.09%), Postives = 102/215 (47.44%), Query Frame = 1 Query: 85 SFFTKKQKHSAAF------SSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFII 693 S F + +H+ A S S + Q +F+ + +FARE I P AA D++ +P + W+L G N H P+ C+ EE+ A G G+ +N L L+ G+ Q+ KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D SK T FI+ Sbjct: 16 SHFGWRSQHTKAVPQCEPGSGFSFELTEQQKEFQATARKFAREEIIPVAAEYDRTGEYPVPLLKRAWEL-GLMNTH---IPESFGGLGLGIIDSCLITEEL--AYGCTGVQTAIEANTLGQVPLIIGGNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPASKAFTGFIV 224
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDP_MYCTU (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium tuberculosis GN=fadE25 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.547e-17 Identity = 55/178 (30.90%), Postives = 86/178 (48.31%), Query Frame = 1 Query: 160 QFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 + + ++ A + IAP AA +D+ FP++ + FN + P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD G+ GI+AF++ Sbjct: 21 EMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFN--AVHIPEEYGGQGADSVATCIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMV 195
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACDP_MYCBO (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis GN=fadE25 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.547e-17 Identity = 55/178 (30.90%), Postives = 86/178 (48.31%), Query Frame = 1 Query: 160 QFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 + + ++ A + IAP AA +D+ FP++ + FN + P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD G+ GI+AF++ Sbjct: 21 EMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFN--AVHIPEEYGGQGADSVATCIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMV 195
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADM_RAT (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadm PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 67/211 (31.75%), Postives = 98/211 (46.45%), Query Frame = 1 Query: 79 CASFFTKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT--DIKA-GSKGITAFII 693 C + TK S + Q +F+ +FARE I P A + D+S +P + W+L G N H P+ C+ EE+ A G G+ +N L ++ G+ QK KYL ++ + A ++EP+AGSDV G+K KA++ Y+ING KMW TNG A V ++ D K SK T FI+ Sbjct: 20 CRAQHTKPSLKQEPGLGFSFELTEQQKEFQTIARKFAREEIIPVAPDYDKSGEYPFPLIKRAWEL-GLINTH---IPESCGGLGLGTFDACLITEEL--AYGCTGVQTAIEANSLGQMPVIIAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAGIKTKAEKKGDEYVINGQKMWITNGGKANWYFVLTRSNPDPKVPASKAFTGFIV 224
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADV_MACFA (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADVL PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 1 Query: 289 GITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFII 693 G+ P E + +E + +VG++ GAH ++ ++ G+ AQK+KYLPKL SGE + A ++EP++GSD ++ A G Y +NG+K+W +NG +A V+AKT + + G ITAF++ Sbjct: 143 GLQVPSELGGVGLCNTQYARLVEIVGMHDLAVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETLAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVV 284
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADM_MOUSE (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadm PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16 Identity = 68/215 (31.63%), Postives = 101/215 (46.98%), Query Frame = 1 Query: 85 SFFTKKQKHSAAFSST------SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT--DIKA-GSKGITAFII 693 S F + +HS A S + Q +F+ + +FARE I P A D+S +P + W+L G N H P+ C+ EE+ A G G+ +N L ++ G+ QK KYL ++ + A ++EP+AGSDV +K KA++ Y+ING KMW TNG A + A++ D K SK T FI+ Sbjct: 16 SHFECRTQHSKAAHKQEPGLGFSFELTEQQKEFQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWEL-GLINAH---IPESCGGLGLGTFDACLITEEL--AYGCTGVQTAIEANSLGQMPVILAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAAIKTKAEKKGDEYVINGQKMWITNGGKANWYFLLARSNPDPKVPASKAFTGFIV 224
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADL_MACFA (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADL PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.947e-16 Identity = 47/179 (26.26%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 163 FKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS--KGITAFII 693 F++S+ +F +E + P + +++ ++V W+ G L G+ + + EE + ++ S G + HS + ++ + +GS Q ++P++ +G+ +GA+AM+E AGSD+ G+K A + +I+NG+K++ +NG ++ ++V A T+ +A S +GI+ F++ Sbjct: 60 FRKSIRKFFQEEVIPHHSEWEKAGEVSREV--WEKAGKQGLLGVNIAEHLGGIGGDLYYAAVVWEEQAYSNCS-GPGFSVHSGIVMSYITNYGSEEQIKHFIPQMTAGKCIGAIAMTELGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGWLSDVVIVVAVTNHEAPSPARGISLFLV 235 The following BLAST results are available for this feature:
BLAST of CF503890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503890 ID=CF503890; Name=CF503890; organism=Citrus sinensis; type=EST; length=694bpback to top |