CF503890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: IVD_CAEEL (Probable acyl coa dehydrogenase 6 OS=Caenorhabditis elegans GN=acdh-6 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 52/182 (28.57%), Postives = 90/182 (49.45%), Query Frame = 1 Query: 115 AAFSST--SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRAS-GSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 651 A SST +++D+ + S+ + +E I P A ++S +P ++K++G + + P + E+I GS+ +S S++ L + GS + ++++L I+G+ V ++A+SEP+AGSDV ++ A R IING+KMW TNG A V T Sbjct: 14 ATTSSTVKHMIYDEPHFAMQNSLAKLIKEKINPNVAQWEKSGRYPAHF-VFKMLGQLGVFAVNKPVDYGGTGRDFAMSIAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIAVSEPHAGSDVSAIRTHARRYGSDLIINGSKMWITNGDQADWACVLVNT 194
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: GCDH_CAEEL (Probable glutaryl-CoA dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 61/220 (27.73%), Postives = 103/220 (46.82%), Query Frame = 1 Query: 61 LGARSLCASFFTKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAP-QEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD----------IKAGSKGIT 681 + +R L ++F+ AF + L +D + S ++ +E + PR ++ F D +L MG+ L G AP Q + + E+ R + ++L I + +GS QK KY+P L SG+ +G ++EPN GS+ GM+ KA D Y +NG+K W +N PV+ +VV+A++ ++ G KG+T Sbjct: 12 IASRGLSSTFYQD------AFQLSDQLTEDER-SLMLSAREYCQERLLPRVTEAYRTEKF--DPSLIPEMGSMGLLG--APYQGYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSPVSDVMVVWARSARHNNKIKGFILERGMKGLT 220
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACADM_CAEEL (Probable medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=T08G2.3 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 60/201 (29.85%), Postives = 98/201 (48.76%), Query Frame = 1 Query: 118 AFSSTSLLFD--DTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQ---EXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHS-NLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIK---AGSKGITAFII 693 A S + FD +TQ + +++ +F+++ + P AA D+S FP W+++ + G+ PQ + + +E +S G G+ G +L I + G+ QK KYL L + + + ++EP AGSDV G+K K ++ YIING+K W T G A+ V A++D K TAFI+ Sbjct: 21 ATQSRQISFDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFP-----WEIVRQAHSLGLMNPQIPEKYGGPGMTTLETALIVEALSY--GCTGIQLGIMGPSLAIAPVYISGNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGGHAKWFFVLARSDPNPKTPAGKAFTAFIV 214
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACAD8_DICDI (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=acad8 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15 Identity = 49/182 (26.92%), Postives = 87/182 (47.80%), Query Frame = 1 Query: 148 DTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII 693 + Q QF+ FA+E + P A D+ FP+DV + GI ++ I +E ++ A S H N+C + +G+ Q+ K+LP L+S E + + ++EP +GSD + KA + YI+NG+K + + G ++ +V +T + G KGI+ ++ Sbjct: 41 EDQKQFQSMALDFAQEKMKPFAEKWDKEEYFPRDV--MREAAELGFGGIYVREDVGGSGLSRLDASIIIEALASADVSTTAFISIH-NMCAGLIDIYGTEEQRKKFLPSLVSMEKIASYCLTEPGSGSDAGSLSTKATKDGDHYILNGSKAFISGGGDSEVYLVMVRTGAEKGPKGISCLLV 219
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: GCDH_BOVIN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 47/169 (27.81%), Postives = 84/169 (49.70%), Query Frame = 1 Query: 154 QLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 654 ++ +++ + +E + PR +++ F +++ MG + G T Q + + E+ R + S+L + + +GS QK KYLP+L GE +G ++EPN GSD GM+ +A + YI++G+K W TN PVA L+V+A+ + Sbjct: 64 EILIRDTFRTYCQERLMPRILLANRNEVFHREII--SEMGELGMLGPTI-QGYSCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMYPIYAYGSEEQKQKYLPRLAKGELLGCFGLTEPNHGSDPSGMETRARHNPSSRSYILSGSKTWITNSPVADLLIVWARCE 229
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: ACOX4_ARATH (Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana GN=ACX4 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 340 HCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAK 648 + IA EI+R S HS+L + + GS AQK+KYLP L V A++EP+ GSD G+ A +V+GG+ ING K W N A L+++A+ Sbjct: 118 NAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFAR 220
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: GCDH_HUMAN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13 Identity = 47/187 (25.13%), Postives = 90/187 (48.13%), Query Frame = 1 Query: 154 QLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD--------IKAGSKGITA 684 ++ +++ + +E + PR +++ F +++ MG + G T +A E+ R + S+L ++ + +GS Q+ KYLP+L GE +G ++EPN+GSD M+ +A + + Y +NG K W TN P+A VV+A+ + ++ G +G++A Sbjct: 64 EILIRDTFRTYCQERLMPRILLANRNEVFHREII--SEMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDGCIRGFLLEKGMRGLSA 247
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: GCDH_MACFA (Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=GCDH PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 47/187 (25.13%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 154 QLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD--------IKAGSKGITA 684 ++ +++ + +E + PR +++ F +++ MG + G T +A E+ R + S L ++ + +GS Q+ KYLP+L GE +G ++EPN+GSD M+ +A + + Y +NG K W TN P+A VV+A+ + ++ G +G++A Sbjct: 64 EILIRDTFRTYCQERLMPRILLANRNEVFHREII--SQMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSPLVMHPIYAYGSEEQRQKYLPRLAKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDGRIRGFLLEKGMRGLSA 247
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: GCDH_MOUSE (Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 358 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 654 E+ R S+L ++ + +GS Q+ KYLP+L GE +G ++EPN GSD GM+ +A + + Y ++G K W TN PVA +V+A+ + Sbjct: 129 ELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPRLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWARCE 229
BLAST of CF503890 vs. ExPASy Swiss-Prot
Match: GCDH_PIG (Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa GN=GCDH PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 48/188 (25.53%), Postives = 90/188 (47.87%), Query Frame = 1 Query: 154 QLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKD-KYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD--------IKAGSKGITA 684 ++ +++ + +E++ PR +++ F +++ MG + G T +A E+ R + S+L ++ + +GS Q+ KYLP+L GE +G ++EPN GSD M+ +A + + Y +NG K W TN PVA VV+A+ + ++ G +G++A Sbjct: 33 EILIRDTFRTYCQEHLMPRIVLANRNEVFHREII--SEMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQQKYLPRLAKGELLGCFGLTEPNHGSDPGSMETRALHNPSNRSYTLNGAKTWITNSPVADLFVVWARCEDNCIRGFLLEKGMRGLSA 217 The following BLAST results are available for this feature:
BLAST of CF503890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503890 ID=CF503890; Name=CF503890; organism=Citrus sinensis; type=EST; length=694bpback to top |