CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:504..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.787e-31
Identity = 69/161 (42.86%), Postives = 92/161 (57.14%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGE--LVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV-SCPYICGKYLDHGVL 532
            K +      WSFS TGA EGA +L+ G+  LVSLSEQ L+DC        SGS  ++GC GGLM  AFEYI+   G++ E  YPYT  DG  CKF+   +AA +S++  ++S  +   A  V  GP +V I+A     Q Y+ G+ + P      LDHGVL
Sbjct:  126 KNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDC--------SGSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAAQLSSYVNVTSGSESDLAAKVTQGPTSVAIDASNQSFQLYVSGIYNEPACSSTQLDHGVL 278          

HSP 2 Score: 36.965 bits (84), Expect = 4.787e-31
Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            D     DWR  GAVT +K+QG CG C
Sbjct:  109 DASAQVDWRTQGAVTPIKNQGQCGGC 134          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.787e-31
Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVL 532
            W+FS  GA+EG + + TG+L++LSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ +KDYPY G DG   +  K+     + ++  + +  ++     V H P+++ I A     Q Y  G+     CG  LDHGV+
Sbjct:  162 WAFSTIGAVEGINQIVTGDLITLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGI-FDGSCGTQLDHGVV 300          

HSP 2 Score: 42.743 bits (99), Expect = 4.787e-31
Identity = 17/27 (62.96%), Postives = 19/27 (70.37%), Query Frame = 1
Query:   13 NDLPTDFDWRDHGAVTGVKDQGACGSC 93
            ++LP   DWR  GAV  VKDQG CGSC
Sbjct:  135 DELPESIDWRKKGAVAEVKDQGGCGSC 161          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.974e-30
Identity = 65/158 (41.14%), Postives = 88/158 (55.70%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVL 532
            K +      W+FSA+G LEG  FL TG+L+SLSEQ LVDC H+         + GCNGGLM+ AF+YI + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V ++A    +Q Y  G+   P    K LDHGVL
Sbjct:  130 KNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD-GSCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVL 279          

HSP 2 Score: 39.2762 bits (90), Expect = 3.974e-30
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR+ G VT VK+QG CGSC
Sbjct:  114 IPKTVDWREKGCVTPVKNQGQCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.147e-30
Identity = 63/149 (42.28%), Postives = 85/149 (57.05%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVL 532
            W+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E DY Y G    SC F   K    +++   +S +E ++AA L K GP++V INA  MQ Y  G+S P   +C  +L DH VL
Sbjct:  296 WAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVL 434          

HSP 2 Score: 43.1282 bits (100), Expect = 5.147e-30
Identity = 17/24 (70.83%), Postives = 19/24 (79.17%), Query Frame = 1
Query:   22 PTDFDWRDHGAVTGVKDQGACGSC 93
            P ++DWR  GAVT VKDQG CGSC
Sbjct:  272 PPEWDWRSKGAVTKVKDQGMCGSC 295          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.175e-30
Identity = 65/158 (41.14%), Postives = 87/158 (55.06%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVL 532
            K +      W+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+YI + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V ++A    +Q Y  G+   P    K LDHGVL
Sbjct:  130 KNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVL 279          

HSP 2 Score: 39.6614 bits (91), Expect = 5.175e-30
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR+ G VT VK+QG CGSC
Sbjct:  114 IPKSVDWREKGCVTPVKNQGQCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.487e-29
Identity = 62/158 (39.24%), Postives = 86/158 (54.43%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVL 532
            K +      WSFS TG+ EGAHF S GELVSLSEQ L+DC  E         +SGC+GGLM  AFEYI+   G++ E  YPY   + G C++      A +S++  +++  +    + V   P++V I+A     Q Y  G+   P    + LDHGVL
Sbjct:  128 KNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE---------NSGCDGGLMTYAFEYIINNNGIDTESSYPYK-AENGKCEYKSENSGATLSSYKTVTAGSESSLESAVNVNPVSVAIDASHQSFQLYTSGIYYEPECSSENLDHGVL 275          

HSP 2 Score: 36.5798 bits (83), Expect = 1.487e-29
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:   34 DWRDHGAVTGVKDQGACGSC 93
            DWR  GAVT VK+QG CG C
Sbjct:  117 DWRSEGAVTPVKNQGQCGGC 136          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 1.487e-29
Identity = 67/158 (42.41%), Postives = 85/158 (53.80%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVL 532
            K +      W+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+YI   GG++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL
Sbjct:  130 KNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVL 280          

HSP 2 Score: 37.3502 bits (85), Expect = 1.487e-29
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            D+P   DW   G VT VK+QG CGSC
Sbjct:  113 DVPKSVDWTKKGYVTPVKNQGQCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.938e-29
Identity = 63/158 (39.87%), Postives = 84/158 (53.16%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGK-YLDHGV 529
            K +      W+FSA  ALEGAHFL TG+LVSLSEQ LVDC        S   + GCNGG    A++YI+   G++ E  YPY   D  +C++D   I A VS++    S DE  +   +   GP++V I+A      +Y GGV     C   Y +H V
Sbjct:  122 KDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDC-------SSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAID-DNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAV 271          

HSP 2 Score: 46.595 bits (109), Expect = 1.938e-29
Identity = 19/29 (65.52%), Postives = 21/29 (72.41%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            PT  +  D DWR+ GAVT VKDQG CGSC
Sbjct:  102 PTTPMAADVDWRNKGAVTPVKDQGQCGSC 130          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.257e-29
Identity = 63/161 (39.13%), Postives = 87/161 (54.04%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICG-KYLDHGVL 532
            K +      WSFS TG+ EGAHF+++G   +LVSLSEQ L+DC            ++GC GGLM  AFEYI+   G++ E  YPYT  DG  CKF  S I A + ++  ++S  +    +   + P++V I+A     Q Y  G+     C    LDHGVL
Sbjct:  127 KNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYG-------NNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNVTSGSEASLQSASNNAPVSVAIDASNESFQLYESGIYYEPACSPTQLDHGVL 280          

HSP 2 Score: 35.4242 bits (80), Expect = 4.257e-29
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:   34 DWRDHGAVTGVKDQGACGSC 93
            DWR  GAVT +K+QG CG C
Sbjct:  116 DWRAQGAVTPIKNQGQCGGC 135          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.271e-29
Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K +      W+FS   A+EG + ++TG L SLSEQ+L+DCD         + +SGCNGGLM+ AF+YI+  GG+ +E DYPY   + G C+  K  +    +S +  +  ++D+     + H P++V I A     Q Y GGV     CG  LDHGV
Sbjct:  153 KDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDT--------TFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYL-MEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGK-CGTDLDHGV 299          

HSP 2 Score: 43.1282 bits (100), Expect = 4.271e-29
Identity = 18/26 (69.23%), Postives = 18/26 (69.23%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            DLP   DWR  GAV  VKDQG CGSC
Sbjct:  136 DLPKSVDWRKKGAVAPVKDQGQCGSC 161          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CYSP7_DICDI4.787e-3142.86Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
RD21A_ARATH4.787e-3139.19Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CATL1_RAT3.974e-3041.14Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATF_HUMAN5.147e-3042.28Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATL1_MOUSE5.175e-3041.14Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CYSP5_DICDI1.487e-2939.24Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATL1_BOVIN1.487e-2942.41Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CRUST_PANBO1.938e-2939.87Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP4_DICDI4.257e-2939.13Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
XCP1_ARATH4.271e-2938.22Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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