CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:504..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.255e-16
Identity = 59/157 (37.58%), Postives = 77/157 (49.04%), Query Frame = 2
Query:   62 ASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            A K +      W+FSA GALE    +       LSEQ LVDC    D       + GCNGG M+SAFEY+    G+   KDYPYT  D G+CK    +    V  F  I S ++   A  ++   +AV ++A   Q Y  GV     C K L+HGV+
Sbjct:  125 AVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEYVAD-NGLAEAKDYPYTAKD-GTCKTSVKRPYTHVQGFKDIDSCDE--LAQTIQERTVAVAVDANPWQFYRSGVLSK--CTKNLNHGVV 268          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.948e-16
Identity = 44/149 (29.53%), Postives = 71/149 (47.65%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG-GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS--SDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            W+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  ++ +    +  +  YP+   +G    F +S+   +V +FS  +    ED+MA  L+  GPL V ++A+  Q Y+GG+   +      +H VL
Sbjct:  124 WAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMSWQDYLGGIIQHHCSSGEANHAVL 263          

HSP 2 Score: 35.4242 bits (80), Expect = 5.948e-16
Identity = 14/30 (46.67%), Postives = 17/30 (56.67%), Query Frame = 1
Query:    4 LPTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   LP  FDWRD   V  V++Q  CG C
Sbjct:   94 IPNVSLPLRFDWRDKHVVNPVRNQEMCGGC 123          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 7.812e-16
Identity = 45/147 (30.61%), Postives = 69/147 (46.94%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA-VWMQTYIGGV-SCPYICGKYLDHGV 529
            W+F+A   +E  + +  G L  LSEQQ++DC          +   GC GG    AFE+I+   GV     YPY     G+CK D    +A ++ ++ +  + +      V   P+ V ++A    Q Y  GV + P  CG  L+H V
Sbjct:   27 WAFAAIATVESIYKIKKGILEPLSEQQVLDC----------AKGYGCKGGWEFRAFEFIISNKGVASGAIYPYKAAK-GTCKTDGVPNSAYITGYARVPRNNESSMMYAVSKQPITVAVDANANFQYYKSGVFNGP--CGTSLNHAV 160          

HSP 2 Score: 41.2022 bits (95), Expect = 7.812e-16
Identity = 15/25 (60.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWRD+GAVT VK+Q  CG+C
Sbjct:    2 VPQSIDWRDYGAVTSVKNQNPCGAC 26          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 3.715e-15
Identity = 44/156 (28.21%), Postives = 64/156 (41.03%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K +      W+FSA   +EG   + TG L   SEQ+L+DCD             GCNGG   SA + + +  G+     YPY G        +K   AA       +    +      + + P++V + A     Q Y GG+     CG  +DH V
Sbjct:  150 KNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVG-PCGNKVDHAV 294          

HSP 2 Score: 40.4318 bits (93), Expect = 3.715e-15
Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            ++P   DWR  GAVT VK+QG+CGSC
Sbjct:  133 NIPEYVDWRQKGAVTPVKNQGSCGSC 158          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 7.255e-15
Identity = 57/179 (31.84%), Postives = 83/179 (46.37%), Query Frame = 2
Query:    8 PPTIFLLTLTGVITAPLLASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYL-DHGVL 532
            PPT     L GVI++     K +      W+ +A G +E    +   + V LS Q+L+DC         G C  GC GG +  AF  +L   G+  EKDYP+ G      C   K    A + +F ++  +E ++A  L   GP+ V IN   ++ Y  GV  + P  C  +L DH VL
Sbjct:  129 PPTCDWRKLDGVISSV----KKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDC---------GRCGDGCRGGFVWDAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTINMKLLKLYKKGVIEATPTSCDPFLVDHSVL 294          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.616e-14
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYL-DHGVL 532
            K + + +  W+ +A G +E    +S  + V +S Q+L+DC         G C  GC+GG +  AF  +L   G+  EKDYP+ G      C   K +  A + +F ++ ++E ++A  L  +GP+ V IN   +Q Y  GV  + P  C   L DH VL
Sbjct:  145 KDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDC---------GRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVL 294          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICG-KYLDHGVL 532
            W+ +A   ++    +   + V +S Q+L+DC+          C +GCNGG +  A+  +L   G+  EKDYP+ G      C   K K  A + +F+++S++E  +A  L  HGP+ V IN   +Q Y  GV  + P  C  + +DH VL
Sbjct:  152 WAMAAADNIQALWRIKHQQFVDVSVQELLDCER---------CGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVL 292          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.111e-14
Identity = 47/159 (29.56%), Postives = 77/159 (48.43%), Query Frame = 2
Query:   56 LLASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC-GKYLDHGV 529
            +L  + +      W+ S   A+E    + +G  V LS QQLVDC        +   + GCNGG   + FEY+ K  G+E + DYPY+G +      DKS+    ++ +  +++ E  +   +   GP++  +    M++Y GG+     C G  L HGV
Sbjct:  122 VLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCS-------TSYGNHGCNGGFAVNGFEYV-KDNGLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFGKPMKSYGGGIFDDSSCLGDNLHHGV 272          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.368e-13
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 2
Query:   65 SKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 457
            +K +      W+F  T  LEG      G+L S SEQQLVDCD         + D+GC GG  +++ ++I +  G+  E DYPY     G+CK  K+ +A    +  V    E  +   + ++GP+AVG++A
Sbjct:  106 AKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCD---------ASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAV-AGTCKKVKN-VATVTGSRRVTDGSETGLQTIIAENGPVAVGMDA 225          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 8.991e-13
Identity = 47/156 (30.13%), Postives = 75/156 (48.08%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN-AVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +++    W+FS  G++EG +     +   LS Q+L+DCD         S  +GC GGL+ SA+EY+ K G V   KD P+       C   K+K   +V ++ V    E  +    +   P +V ++ +  +  Y  GV     CGK L+H V+
Sbjct:  245 KDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD---------SFSNGCQGGLLESAYEYVRKYGLVS-AKDLPFV-DKARRCSVPKAK-KVSVPSYHVFKGKE--VMTRSLTSSPCSVYLSVSPELAKYKSGVFTGE-CGKSLNHAVV 385          

HSP 2 Score: 32.3426 bits (72), Expect = 8.991e-13
Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 1
Query:   28 DFDWRDHGAVTGVKDQGACGSC 93
            + DWR   +VT VKDQ  CG C
Sbjct:  232 NLDWRRSSSVTSVKDQSNCGGC 253          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATL1_PARTE2.255e-1637.58Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATO_MOUSE5.948e-1629.53Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
BROM2_ANACO7.812e-1630.61Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
PAPA1_CARPA3.715e-1528.21Papain OS=Carica papaya PE=1 SV=1[more]
CATW_FELCA7.255e-1531.84Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATW_HUMAN1.616e-1432.08Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATW_MOUSE2.111e-1432.00Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATLL_PHACE2.111e-1429.56Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
ACP1_ENTHI1.368e-1333.59Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CYSP_THEPA8.991e-1330.13Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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