CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:504..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.247e-29
Identity = 65/158 (41.14%), Postives = 84/158 (53.16%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVL 532
            K +      W+FSATGALEG  F  TG+LVSLSEQ LVDC      E       GCNGGLM++AF Y+   GG++ E+ YPY G D  +C +     AA  + F  +   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL
Sbjct:  130 KNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNE-------GCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVL 280          

HSP 2 Score: 39.6614 bits (91), Expect = 7.247e-29
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            ++P   DWR+ G VT VK+QG CGSC
Sbjct:  113 EIPKSVDWREKGYVTPVKNQGQCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 9.417e-29
Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVL 532
            W+FS T A+EG + + TGEL+SLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY G  G    F K+    ++  +  + + ++      + + P++V I A     Q Y  G+     CG  LDH V+
Sbjct:  170 WAFSTTAAVEGINKIVTGELISLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTG-SCGTNLDHAVV 308          

HSP 2 Score: 40.4318 bits (93), Expect = 9.417e-29
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            ++P   DWR  GAV  +KDQG CGSC
Sbjct:  144 EVPETVDWRQKGAVNPIKDQGTCGSC 169          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 9.432e-29
Identity = 60/158 (37.97%), Postives = 87/158 (55.06%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYIC-GKYLDHGVL 532
            K +      +SFS TG++EG   + TG+LVSLSEQ ++DC        S   + GCNGGLM +AFEYI+K  G+  E+ YPY       CKF +  +AA ++++  I + ++    N +   P++V I+A     Q Y  GV     C  + LDHGVL
Sbjct:  137 KDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCS-------SSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVL 287          

HSP 2 Score: 40.0466 bits (92), Expect = 9.432e-29
Identity = 16/24 (66.67%), Postives = 18/24 (75.00%), Query Frame = 1
Query:   22 PTDFDWRDHGAVTGVKDQGACGSC 93
            P + DWR+  AVT VKDQG CGSC
Sbjct:  122 PLNVDWREKDAVTPVKDQGQCGSC 145          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.441e-29
Identity = 67/158 (42.41%), Postives = 85/158 (53.80%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICG-KYLDHGVL 532
            K +      W+FSATGALEG HFL   ELVSLSEQQLVDC  +         + GC GG M SAF+YI   GG++ E  YPY   D  SC+FD + I A  +    +   E+ +   +   GP++V I+A     Q Y  GV     C   +LDHGVL
Sbjct:  122 KDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYG-------NDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED-RSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVL 271          

HSP 2 Score: 34.2686 bits (77), Expect = 9.441e-29
Identity = 14/25 (56.00%), Postives = 15/25 (60.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +  D DWR    VT VKDQ  CGSC
Sbjct:  106 MAADVDWRTKALVTPVKDQEQCGSC 130          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.599e-28
Identity = 66/158 (41.77%), Postives = 84/158 (53.16%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVL 532
            K +      W+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+YI   G ++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL
Sbjct:  130 KNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVL 280          

HSP 2 Score: 37.3502 bits (85), Expect = 1.599e-28
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            D+P   DW   G VT VK+QG CGSC
Sbjct:  113 DVPKSVDWTKKGYVTPVKNQGQCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.611e-28
Identity = 65/159 (40.88%), Postives = 86/159 (54.09%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVL 532
            K +      W+FS TGALEG HF + G+LVSLSEQ LVDC     PE +     GCNGGLM+ AF+Y+   GG++ E+ YPYT  D   C++     AA  + F  I    ++     V   GP++V I+A     Q Y  G+   P    + LDHGVL
Sbjct:   17 KDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSR---PEGN----QGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVL 168          

HSP 2 Score: 40.0466 bits (92), Expect = 1.611e-28
Identity = 16/24 (66.67%), Postives = 17/24 (70.83%), Query Frame = 1
Query:   22 PTDFDWRDHGAVTGVKDQGACGSC 93
            P   DWR+ G VT VKDQG CGSC
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSC 25          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.073e-28
Identity = 64/161 (39.75%), Postives = 90/161 (55.90%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG--VEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVL 532
            K +      W+FS  G +EG   ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ + G  V  E  YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y GG+  SC     K LDHGVL
Sbjct:  142 KVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYNGGILTSC---TSKQLDHGVL 290          

HSP 2 Score: 39.2762 bits (90), Expect = 2.073e-28
Identity = 17/28 (60.71%), Postives = 18/28 (64.29%), Query Frame = 1
Query:   10 TNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            T   P   DWR+ GAVT VK QG CGSC
Sbjct:  123 TGRAPAAVDWREKGAVTPVKVQGQCGSC 150          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.528e-28
Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVL 532
            W+ +A G LE  + +    L++LSEQQL+DCD         S +  C+GGLM++AFE ++ AGG+  E DYPY GT  G CK D  K A +VS+    I  +E+ +   L+  GP+A+ I+A  + TY  G+   + C    L+H VL
Sbjct:  151 WAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTK-GVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGII--HFCENLGLNHAVL 286          

HSP 2 Score: 44.2838 bits (103), Expect = 3.528e-28
Identity = 17/27 (62.96%), Postives = 22/27 (81.48%), Query Frame = 1
Query:   13 NDLPTDFDWRDHGAVTGVKDQGACGSC 93
            ++LP +FDWR +  +T VKDQGACGSC
Sbjct:  124 DELPQNFDWRVNNKMTSVKDQGACGSC 150          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.746e-28
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVL 532
            K +      W+FSA   +E  + L TGE+++LSEQ+LV+C        +   +SGCNGGLM+ AF++I+K GG++ E DYPY   D G C  ++      ++  F  +  ++++     V H P++V I A     Q Y  GV     CG  LDHGV+
Sbjct:  157 KNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECS-------TNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVD-GKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTSLDHGVV 305          

HSP 2 Score: 40.817 bits (94), Expect = 7.746e-28
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            +LP   DWR+ GAV  VK+QG CGSC
Sbjct:  140 ELPESVDWREKGAVAPVKNQGQCGSC 165          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.747e-28
Identity = 59/158 (37.34%), Postives = 88/158 (55.70%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGK-YLDHGVL 532
            K +      W+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E DY Y G    +C F        +++   +S +E+++AA L + GP++V INA  MQ Y  G++ P+  +C   ++DH VL
Sbjct:  265 KNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQG-HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVL 412          

HSP 2 Score: 42.3578 bits (98), Expect = 7.747e-28
Identity = 19/28 (67.86%), Postives = 22/28 (78.57%), Query Frame = 1
Query:   13 NDL-PTDFDWRDHGAVTGVKDQGACGSC 93
            NDL P ++DWR  GAVT VK+QG CGSC
Sbjct:  246 NDLAPPEWDWRKKGAVTEVKNQGMCGSC 273          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATL1_CANFA7.247e-2941.14Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
GCP1_ARATH9.417e-2939.19Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP3_DICDI9.432e-2937.97Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSP3_HOMAM9.441e-2942.41Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATL2_BOVIN1.599e-2841.77Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_CHICK1.611e-2840.88Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CYSP_TRYBB2.073e-2839.75Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATV_NPVAH3.528e-2839.19Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
ORYB_ORYSJ7.746e-2836.08Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CATF_MOUSE7.747e-2837.34Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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