CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:504..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.336e-23
Identity = 52/160 (32.50%), Postives = 85/160 (53.12%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG---GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKYLDHGVL 532
            K + H    W+FS  GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E+I+K GG+  + DYPY   +G   G  K +   +   +  +  + ++++      V H P+   I++     Q Y  GV     CG  L+HGV+
Sbjct:  153 KDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNV--MIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGV-FDGSCGTNLNHGVV 300          

HSP 2 Score: 40.4318 bits (93), Expect = 1.336e-23
Identity = 17/25 (68.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ GAVT VKDQG C SC
Sbjct:  137 LPKSVDWRNEGAVTEVKDQGHCRSC 161          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.336e-23
Identity = 60/162 (37.04%), Postives = 87/162 (53.70%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVL 532
            K + H    W+FS TG+LE A+  +TG+ VSLSEQQLVDC        +   + GC+GGL + AFEYI   GG++ E+ YPYTG + G C +    +   V    N ++ + DE + A  LV+  P++V    +   + Y  GV     CG     ++H VL
Sbjct:  161 KDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDC-------ATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN-GICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVR--PVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVL 312          

HSP 2 Score: 38.891 bits (89), Expect = 1.336e-23
Identity = 16/25 (64.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ G V+ VKDQG CGSC
Sbjct:  145 LPETKDWREDGIVSPVKDQGHCGSC 169          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.458e-23
Identity = 66/160 (41.25%), Postives = 86/160 (53.75%), Query Frame = 2
Query:   62 ASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVL 532
            A K +      W+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+Y+   GG++ E+ YPY G +  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL
Sbjct:  128 AVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVL 280          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.947e-23
Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      W+FSA   +E  + +     + LSEQQLVDCD           ++GCNGGLM+ AFE I++AGG+  E  YPYTG D G CK + ++       ++     E ++   L + GP++V I+ V +  Y  GV+        L+HGVL
Sbjct:  149 KMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD---------KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVD-GVCK-NTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKHCSVDHGLNHGVL 292          

HSP 2 Score: 38.1206 bits (87), Expect = 2.947e-23
Identity = 15/25 (60.00%), Postives = 17/25 (68.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P  FDWRD  +VT VK Q  CGSC
Sbjct:  133 VPDSFDWRDRNSVTSVKMQKECGSC 157          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.951e-23
Identity = 52/156 (33.33%), Postives = 84/156 (53.85%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      W+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL
Sbjct:  128 KNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVL 272          

HSP 2 Score: 37.3502 bits (85), Expect = 2.951e-23
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P    P +FDWR    VT VK+QG CG+C
Sbjct:  108 PPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.974e-23
Identity = 47/142 (33.10%), Postives = 78/142 (54.93%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV 487
            K +      W+F A  A+EG + + TG+L+SLSEQQLVDC            + GC GG    AF+YI+  GG+  E+ YPYTGT+ G+C   ++    ++ ++  + S++++     V + P++V ++A     Q Y  G+
Sbjct:   19 KNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDCSTR---------NHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTN-GTCDTKENAHVVSIDSYRNVPSNDEKSLQKAVANQPVSVTMDAAGRDFQLYRNGI 150          

HSP 2 Score: 40.817 bits (94), Expect = 2.974e-23
Identity = 16/25 (64.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ GAV  VK+QG CGSC
Sbjct:    3 LPDSIDWREKGAVVPVKNQGGCGSC 27          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.840e-23
Identity = 52/156 (33.33%), Postives = 84/156 (53.85%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      W+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL
Sbjct:  128 KNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVL 272          

HSP 2 Score: 37.3502 bits (85), Expect = 3.840e-23
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P    P +FDWR    VT VK+QG CG+C
Sbjct:  108 PPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 4.993e-23
Identity = 57/158 (36.08%), Postives = 83/158 (52.53%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK-YLDHGVL 532
            K + H   +W+FSATG+LEG  F  T  L+ LSEQ L+DC          +   GC+GG M  AF+Y+   GG+  E+ YPY G  G  C++     AA V +F  I   E+ +   + K GP++V ++A     Q Y  G+     C + +L+H VL
Sbjct:  130 KNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDC-------MGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRG-QGRECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVL 279          

HSP 2 Score: 30.0314 bits (66), Expect = 4.993e-23
Identity = 13/24 (54.17%), Postives = 15/24 (62.50%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGS 90
            +P   DWR  G VT VK+QG C S
Sbjct:  114 VPKRVDWRQLGYVTPVKNQGHCAS 137          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.238e-23
Identity = 61/159 (38.36%), Postives = 87/159 (54.72%), Query Frame = 2
Query:   62 ASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVL 532
            A K +      W+FS   A+EG + + TGELVSLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY GT+G      K+     +  +  + S ++      V + P++V I+A     Q Y  G+     CG  +DH V+
Sbjct:  114 AIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGK-CGTNMDHAVV 263          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.101e-22
Identity = 50/156 (32.05%), Postives = 82/156 (52.56%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      W+F+  G+LE    +   + ++LSEQQL+DCD           D+GC+GGL+++AFE ++  GG++ E DYPY   + G C+ + +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL
Sbjct:  129 KNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYE-ANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGI-MKYCANHGLNHAVL 273          

HSP 2 Score: 37.7354 bits (86), Expect = 1.101e-22
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P +  P +FDWR    VT VK+QG CG+C
Sbjct:  109 PPDKGPLEFDWRRLNKVTSVKNQGMCGAC 137          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CPR3_ARATH1.336e-2332.50Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ORYC_ORYSJ1.336e-2337.04Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATL1_PIG1.458e-2341.25Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATV_GVXN2.947e-2335.48Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATV_NPVAC2.951e-2333.33Viral cathepsin OS=Autographa californica nuclear ... [more]
CPGP1_ZINOF2.974e-2333.10Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATV_NPVRO3.840e-2333.33Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
TEST2_RAT4.993e-2336.08Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CYSP4_BRANA7.238e-2338.36Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CATV_NPVCF1.101e-2232.05Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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