CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:504..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 87.8113 bits (216), Expect = 1.988e-21
Identity = 58/160 (36.25%), Postives = 80/160 (50.00%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVL 532
            K +      W+FS TGALE A  ++TG+++SL+EQQLVDC  + +       + GC GGL + AFEYIL   G+  E  YPY G D G CKF   K    V + + I+  DE+ M   +  + P++           Y  G+     C K  D   H VL
Sbjct:  133 KNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD-GYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVL 284          

HSP 2 Score: 33.8834 bits (76), Expect = 1.988e-21
Identity = 16/29 (55.17%), Postives = 18/29 (62.07%), Query Frame = 1
Query:   10 TNDLPTDFDWRDHGA-VTGVKDQGACGSC 93
            T   P   DWR  G  V+ VK+QGACGSC
Sbjct:  113 TGPYPPSVDWRKKGNFVSPVKNQGACGSC 141          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.988e-21
Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVL 532
            W+F+A GA+EG  F  TG L  LS Q L+DC            + GC  G  + AFEY+LK  G+E E  YPY G D G C++     +A ++++  +  +E  +   +   GP++  I+A     + Y GG+     C  Y ++H VL
Sbjct:  139 WAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVG-------NKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKD-GPCRYRSENASANITDYVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVL 279          

HSP 2 Score: 36.965 bits (84), Expect = 1.988e-21
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ G VT V++QG CGSC
Sbjct:  114 LPDYKDWREEGYVTPVRNQGKCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.328e-21
Identity = 64/161 (39.75%), Postives = 86/161 (53.42%), Query Frame = 2
Query:   62 ASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            A K +      W+FSA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++   G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV ++A    TY GGV    +  + LDHGVL
Sbjct:  137 AVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD---------KTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCV-SEQLDHGVL 287          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.328e-21
Identity = 54/161 (33.54%), Postives = 89/161 (55.28%), Query Frame = 2
Query:   56 LLASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVL 532
            L+  K +      W+FSA  A+E  + + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+++K GG++ E+DYPY   +G   ++ K+     + ++  +  + ++     V H P+++ + A     Q Y  G+     CG  +DHGV+
Sbjct:   30 LVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGK-CGTAVDHGVV 181          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.588e-21
Identity = 52/159 (32.70%), Postives = 82/159 (51.57%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLV---KHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVL 532
            K + +    W+FS TG +EG +  +    +S SEQQLVDC            ++GC+GGLM +A++Y LK  G+E E  YPYT  + G C+++K    A V+ +  + S  +    NLV   +   +AV + + +M  Y  G+     C    ++H VL
Sbjct:  124 KDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWG-------NNGCSGGLMENAYQY-LKQFGLETESSYPYTAVE-GQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVESDFMM-YRSGIYQSQTCSPLRVNHAVL 272          

HSP 2 Score: 40.0466 bits (92), Expect = 2.588e-21
Identity = 16/25 (64.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR+ G VT VKDQG CGSC
Sbjct:  108 VPDKIDWRESGYVTEVKDQGNCGSC 132          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.377e-21
Identity = 54/152 (35.53%), Postives = 77/152 (50.66%), Query Frame = 2
Query:   86 DRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVL 532
            D  W+F+ TGA+E      TG+L  LS Q LVDC            ++GC GG   +AF+Y+L  GG+E E  YPY G D G C+++     A ++ F  +   ED + A +   GP+  GI+A     + Y GG+   P      + HGVL
Sbjct:  137 DACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKP-------QGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD-GPCRYNPKNSKAEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVL 280          

HSP 2 Score: 30.8018 bits (68), Expect = 4.377e-21
Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR  G VT V+ QG C +C
Sbjct:  115 LPKFVDWRKKGYVTPVRRQGDCDAC 139          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 4.377e-21
Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVL 532
            W+F+A GA+EG  F  TG L  LS Q L+DC            ++GC  G  + AF Y+LK  G+E E  YPY G D G C++     +A ++ F  +  +E  +   +   GP++  I+A     + Y GGV     C  Y ++H VL
Sbjct:  139 WAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCS-------KSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKD-GPCRYHSENASANITGFVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSYVVNHAVL 279          

HSP 2 Score: 36.1946 bits (82), Expect = 4.377e-21
Identity = 15/25 (60.00%), Postives = 17/25 (68.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR  G VT V++QG CGSC
Sbjct:  114 LPNFKDWRKEGYVTPVRNQGKCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.380e-21
Identity = 49/156 (31.41%), Postives = 82/156 (52.56%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      W+F+  G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E ++  GG++ E DYPY   + G C+ + +K    V   +  ++  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL
Sbjct:  129 KNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYE-ANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVGYKRGI-IRYCENHGLNHAVL 273          

HSP 2 Score: 37.7354 bits (86), Expect = 4.380e-21
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P +  P +FDWR    VT VK+QG CG+C
Sbjct:  109 PPDKGPLEFDWRRLNKVTSVKNQGMCGAC 137          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.388e-21
Identity = 47/157 (29.94%), Postives = 80/157 (50.96%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD-KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K++      W+FSA   +EG + + TG L+SLSEQ+L+DC    +         GCNGG +   F++I+  GG+  E++YPYT  D G C  D +++    +  +  +  + +      V + P++V ++A     + Y  G+     CG  +DH V
Sbjct:  143 KSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD-GECNLDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTG-PCGTAIDHAV 290          

HSP 2 Score: 36.5798 bits (83), Expect = 7.388e-21
Identity = 14/25 (56.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP+  DWR  GAV  +K QG CG C
Sbjct:  127 LPSYVDWRSAGAVVDIKSQGECGGC 151          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 82.8037 bits (203), Expect = 9.610e-21
Identity = 47/157 (29.94%), Postives = 80/157 (50.96%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD-KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K++      W+FSA   +EG + + TG L+SLSEQ+L+DC    +         GCNGG +   F++I+  GG+  E++YPYT  D G C  D +++    +  +  +  + +      V + P++V ++A     + Y  G+     CG  +DH V
Sbjct:  143 KSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQD-GECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTG-PCGTAVDHAV 290          

HSP 2 Score: 36.5798 bits (83), Expect = 9.610e-21
Identity = 14/25 (56.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP+  DWR  GAV  +K QG CG C
Sbjct:  127 LPSYVDWRSAGAVVDIKSQGECGGC 151          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATH_HUMAN1.988e-2136.25Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATJ_MOUSE1.988e-2133.56Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CYSP_TRYCR2.328e-2139.75Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSPL_SOLLC2.328e-2133.54Low-temperature-induced cysteine proteinase (Fragm... [more]
CATLL_FASHE2.588e-2132.70Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATR_MOUSE4.377e-2135.53Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATJ_RAT4.377e-2134.23Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATV_NPVAP4.380e-2131.41Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
ACTN_ACTDE7.388e-2129.94Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH9.610e-2129.94Actinidain OS=Actinidia chinensis PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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