CF503893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_ARCFU (50S ribosomal protein L7Ae OS=Archaeoglobus fulgidus GN=rpl7ae PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.787e-12 Identity = 34/99 (34.34%), Postives = 55/99 (55.56%), Query Frame = 3 Query: 141 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQE 437 + L L+ + E +K+G E K++ RG L IA ++ P +++ H+P+LCEE ++PYIYV SK DL A + P ++ +GEL +E Sbjct: 11 MQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVPCASAAII---NEGELRKE 106
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_THEGJ (50S ribosomal protein L7Ae OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12 Identity = 34/107 (31.78%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 135 KKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLK 455 ++L+++ L+ V A + +++G E K++ RG L +IA ++ P +++ H+P LCEE +IPYIYV SK++L A + V ++ EL ++ K+K Sbjct: 13 QELAEKALEAVEIARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGLEVAAASVAIIEPGKARELVEDIAMKVK 119
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_METJA (50S ribosomal protein L7Ae OS=Methanocaldococcus jannaschii GN=rpl7ae PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12 Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 135 KKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGEL 428 +++ K L V +A + +K+G EV K++ RG L +IA ++ P +V+ H+P LCEE IPY YVASK+DL A + V ++ + EL Sbjct: 11 EEIQKELLDAVAKAQK---IKKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLGKAAGLEVAASSVAIINEGDAEEL 105
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_META3 (50S ribosomal protein L7Ae OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.754e-12 Identity = 30/92 (32.61%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 135 KKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 410 +++ ++T +++ ++ + +K+G EV K++ RG L V+A ++ P +++ H+PI+CEE IPY Y+A+KEDL A + T V ++ + Sbjct: 11 QEMEEKTAEVLSKSEK---VKKGANEVTKAVERGTAKLVVLAKDVQPEEIVAHIPIICEEKGIPYTYIATKEDLGKAIGLEVSTAAVAIIAE 99
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_SULAC (50S ribosomal protein L7Ae OS=Sulfolobus acidocaldarius GN=rpl7ae PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11 Identity = 29/77 (37.66%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 135 KKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANA 365 ++L+ + L+ V++A + +K+G E K++ R L VIA ++ P +++ H+P+LCEE IPY+YV SK+ L A Sbjct: 13 QELADKVLEAVKKAKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLGEA 89
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_PYRCJ (50S ribosomal protein L7Ae OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11 Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = 3 Query: 117 AKPLAGKK----------LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLAN-AGATKRPTCCVLVLTKPTKGEL 428 A PL GK ++++ L+++ A + +K+G E K++ RG L +IA ++ P +V+ H+P+LCEE +PY+YV SKE L AG V++ GEL Sbjct: 12 ANPLPGKPFYVRFEVPSDVAEKALEILSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAGINVAAAAAVVIEAGQAAGEL 126
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_PICTO (50S ribosomal protein L7Ae OS=Picrophilus torridus GN=rpl7ae PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11 Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 3 Query: 141 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDL 356 L K L +V + + +++G EVVKSI RG L VIA ++SP +V+ ++P LCEE +PY+YV K DL Sbjct: 13 LEKAVLDMVENSYKTGKVRKGTNEVVKSIERGESKLVVIAEDVSPAEVVYYLPTLCEERKVPYVYVKKKSDL 84
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_THEVO (50S ribosomal protein L7Ae OS=Thermoplasma volcanium GN=rpl7ae PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 31/74 (41.89%), Postives = 48/74 (64.86%), Query Frame = 3 Query: 141 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLAN 362 +S++ L LV A +K+G EV+KSI RG L VIA +++P +V+ ++P LCE+ +PY+YV K DL + Sbjct: 14 VSQKALDLVESAFRSGKIKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGS 87
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_METMP (50S ribosomal protein L7Ae OS=Methanococcus maripaludis GN=rpl7ae PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 35/110 (31.82%), Postives = 65/110 (59.09%), Query Frame = 3 Query: 135 KKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQ--EEQDKLKA 458 ++L ++T ++V A + +K+G EV K++ +G L VIA ++ P +++ H+P++C+E I Y Y ++KE L A + PT + V+ + + EL E+ + LKA Sbjct: 11 QELEEKTAEVVANAEK---IKKGANEVTKAVEKGIAKLVVIAQDVQPEEIVAHIPVICDEKGIAYSYSSTKEALGKAAGLEVPTSAIAVVAEGSADELKDLVEKLNGLKA 117
BLAST of CF503893 vs. ExPASy Swiss-Prot
Match: RL7A_PYRAE (50S ribosomal protein L7Ae OS=Pyrobaculum aerophilum GN=rpl7ae PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11 Identity = 33/97 (34.02%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 141 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLAN-AGATKRPTCCVLVLTKPTKGEL 428 ++++ L+++ A + +K+G E K++ RG L +IA ++ P +V+ H+P+LCEE +PY+YV SKE L AG V++ GEL Sbjct: 30 VAEKALEILSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAGINVSAAAAVVIEPGQAAGEL 126 The following BLAST results are available for this feature:
BLAST of CF503893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503893 ID=CF503893; Name=CF503893; organism=Citrus sinensis; type=EST; length=494bpback to top |