CF503899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: UDG_RICTY (UDP-glucose 6-dehydrogenase OS=Rickettsia typhi GN=udg PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.609e-17 Identity = 61/177 (34.46%), Postives = 87/177 (49.15%), Query Frame = 2 Query: 62 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 + I IG+GYVG ++ I + V D +I+ N LPIYE LD +KQ L F+ D VF++V TP+K G ADL Y A ++ D ++V KSTVP + I L +KG F + SNPEFL EG+A++D P+R+++G Sbjct: 1 MNITFIGSGYVG--LVSGIIMGYLGHNVTCFDNDDVKISKLNKKILPIYEAKLDEYLKQALESDRLKFTNIYSNDFRNVDAVFITVGTPSKELG-----EADLKYVYDAVDKVSKHINKDCLIVIKSTVPPGSCNNIIAYL--KAKGFSFNVASNPEFLREGSAVEDFLYPDRIVVG 168
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: UDG_RICPR (UDP-glucose 6-dehydrogenase OS=Rickettsia prowazekii GN=udg PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16 Identity = 59/177 (33.33%), Postives = 87/177 (49.15%), Query Frame = 2 Query: 62 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 + I IG+GYVG ++ I + V +D +I+ N LPIYE LD +K L F+ D +F++V TP+K G ADL Y A ++ D ++V KSTVP + I L +KG F + SNPEFL EG+A++D P+R+++G Sbjct: 1 MNITFIGSGYVG--LVSGIIMGYLGHNVTCLDNDDVKISKLNKKILPIYEAKLDEYLKHALESDRLKFTNIYSNEFRNFDAIFITVGTPSKELG-----EADLKYVYDAVDKVSKHINKDCLIVIKSTVPPGSCNNIIAYL--KAKGFSFNVASNPEFLREGSAVEDFLYPDRIVVG 168
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: ALGD_PSEAE (GDP-mannose 6-dehydrogenase OS=Pseudomonas aeruginosa GN=algD PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.367e-15 Identity = 58/184 (31.52%), Postives = 94/184 (51.09%), Query Frame = 2 Query: 62 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGK-NLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKIL---THNSKGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 ++I G GYVG ++ + EV VD+S ++I+ N + PI EPGL+ +++Q R L +TD +K V ++D+ F+ V TP+K G DL Y E+ R I + S+ +VV + +P + ++ + G+ F + +NPEFL E TAI+D P +IG Sbjct: 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSFICVGTPSKKNG-----DLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIG 177
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: WECC_METM7 (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=wecC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.994e-15 Identity = 59/176 (33.52%), Postives = 88/176 (50.00%), Query Frame = 2 Query: 65 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 KIC IG GY+G PT +++A EV VD++ R+N + +L I EPGL +VK KNL T E EAD + V TP G+ K DLTY SA + I K ++V +ST+P +T + I + + K + PE + G +++L +R++ G Sbjct: 11 KICVIGLGYIGLPTASMLANH--GYEVVGVDVNEKRVNHIKNGELKIEEPGLLTLVKGAINSKNLNVQTSAE----EADAFIICVPTPALENEDGS-KKCDLTYVMSAVQAIIPFLKDGNLIVVESTIPPETTKKIYETINK-----KIYVAHCPERVLPGKILKELVENDRIIGG 174
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: ALGD_PSEPK (GDP-mannose 6-dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=algD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.534e-14 Identity = 60/185 (32.43%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 62 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQG-LGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 ++I G GYVG + + EV VD+S ++I+ N + PI EPGL+ +++Q L +TD + + +D+ + V TP+K G LG L Y ES R V+ D ++ IVV + +P + IL S G+ F + NPEFL E TAI+D P +IG Sbjct: 1 MRISIFGLGYVGAVCAGCLTAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGIANGRLRGTTDFAEAIRASDVSMICVGTPSKKNGDLG------LEYIESVCREIGYVLRDTTRRHTIVVRSTVLPGTVKNVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDQPPMTVIG 177
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: WECC_METMP (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Methanococcus maripaludis GN=wecC PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.464e-14 Identity = 57/176 (32.39%), Postives = 89/176 (50.57%), Query Frame = 2 Query: 65 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 KIC IG GY+G PT +++A +V VD++ R+N + +L I EPGL +VK KNL +V +EAD + V TP + G+ K DL+Y SA I K ++V +ST+P +T + I + L K + PE + G +++L +R++ G Sbjct: 11 KICVIGLGYIGLPTASMLANH--GYDVVGVDVNEKRVNQIKNGELKIEEPGLLTLVKGAINSKNL----NVRTSATEADAFIICVPTPALAKEDGS-KKCDLSYVMSAVEAILPFVKDGNLIVIESTIPPETTKKIYETLNK-----KIYVAHCPERVLPGKILKELVENDRIIGG 174
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: ALGD_PSESY (GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. syringae GN=algD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14 Identity = 61/185 (32.97%), Postives = 92/185 (49.73%), Query Frame = 2 Query: 62 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ--CRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 ++I G GYVG ++ + EV VDIS ++I+ N+ + PI EPGL+ ++++ GK L +TD + + D+ + V TP+K G +L Y ES R V+ D + IVV + +P A + IL S G+ F + NPEFL E TAI+D P +IG Sbjct: 1 MRISIFGLGYVGAVCAGCLSAR--GHEVVGVDISSTKIDLINNGKSPIVEPGLEELLQKGISTGK-LRGTTDFAEAIRATDLSMICVGTPSKKNG-----DLELDYIESVCREIGYVLRDKATRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDLPPMTVIG 177
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: ALGD_PSESM (GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. tomato GN=algD PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14 Identity = 60/185 (32.43%), Postives = 92/185 (49.73%), Query Frame = 2 Query: 62 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ--CRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 ++I G GYVG ++ + +V VDIS ++I+ N+ + PI EPGL+ ++++ GK L +TD + + D+ + V TP+K G +L Y ES R V+ D + IVV + +P A + IL S G+ F + NPEFL E TAI+D P +IG Sbjct: 1 MRISIFGLGYVGAVCAGCLSAR--GHDVVGVDISSTKIDLINNGKSPIVEPGLEELLQKGLATGK-LRGTTDFAEAIRATDLSMICVGTPSKKNG-----DLELDYIESVCREIGYVLRDKNTRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDLPPMTVIG 177
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: ALGD_PSESH (GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. phaseolicola GN=algD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.299e-13 Identity = 60/185 (32.43%), Postives = 92/185 (49.73%), Query Frame = 2 Query: 62 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ--CRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS---KGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 ++I G GYVG ++ + +V VDIS ++I+ N+ + PI EPGL+ ++++ GK L +TD + + D+ + V TP+K G +L Y ES R V+ D + IVV + +P A + IL S G+ F + NPEFL E TAI+D P +IG Sbjct: 1 MRISIFGLGYVGAVCAGCLSAR--GHDVVGVDISSTKIDLINNGKSPIVEPGLEELLQKGISTGK-LRGTTDFAEAIRATDLSMICVGTPSKKNG-----DLELDYIESVCREIGYVLRDKATRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLRESTAIKDYDLPPMTVIG 177
BLAST of CF503899 vs. ExPASy Swiss-Prot
Match: WECC_METM5 (UDP-N-acetyl-D-mannosamine dehydrogenase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=wecC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.779e-13 Identity = 56/176 (31.82%), Postives = 88/176 (50.00%), Query Frame = 2 Query: 65 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPNRVLIG 589 KIC IG GY+G PT +++A EV VD++ R+N + +L I EPGL +VK KNL +V+ +EAD + V TP G+ K DLTY A + I K ++V +ST+P + + I + + K + PE + G +++L +R++ G Sbjct: 11 KICVIGLGYIGLPTASMLANH--GYEVVGVDVNEKRVNQIKNGELKIEEPGLLTLVKGAINSKNL----NVQTSATEADAFIICVPTPALENEDGS-KKCDLTYVMGAVQNIIPFLKEGNLIVIESTIPPEITKKIYETIDK-----KIYVAHCPERVLPGKILKELVENDRIIGG 174 The following BLAST results are available for this feature:
BLAST of CF503899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503899 ID=CF503899; Name=CF503899; organism=Citrus sinensis; type=EST; length=590bpback to top |