CF503908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: GABD_ECOLI (Succinate-semialdehyde dehydrogenase [NADP+] OS=Escherichia coli (strain K12) GN=gabD PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 57/184 (30.98%), Postives = 92/184 (50.00%), Query Frame = 2 Query: 77 DGDVFKYYA--DGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 D ++F+ A +GEW +N+G+++ + NP V +E ++AA A W +RA +L ++ EH+ +A + E KP +A E+ + + + AEEG RI G D+ PG++ K + K P+GV AI P+N+P + K PAL AG ++VLKP Sbjct: 5 DSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYG-------DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.070e-19 Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y G + +++SG + +NP KVQ S+E+V + +++A QK+WA +R+ +L +A IL+E +A + KP A+ +++ D++ Y A I GE P E T + T + PLGV I +NYPV +A+ K APAL AGN+++ KP Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE-------QIPLRE-TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.070e-19 Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y G + +++SG + +NP KVQ S+E+V + +++A QK+WA +R+ +L +A IL+E +A + KP A+ +++ D++ Y A I GE P E T + T + PLGV I +NYPV +A+ K APAL AGN+++ KP Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE-------QIPLRE-TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.070e-19 Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y G + +++SG + +NP KVQ S+E+V + +++A QK+WA +R+ +L +A IL+E +A + KP A+ +++ D++ Y A I GE P E T + T + PLGV I +NYPV +A+ K APAL AGN+++ KP Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE-------QIPLRE-TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.070e-19 Identity = 57/178 (32.02%), Postives = 92/178 (51.69%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y G + +++SG + +NP KVQ S+E+V + +++A QK+WA +R+ +L +A +L+E +A + KP A+ +++ D++ Y A I GE P E T + T + PLGV I +NYPV +A+ K APAL AGN+++ KP Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDLLRERNDELAALETLDTGKPLAETRAVDIVTGADVLEYYAGLVPAIEGE-------QIPLRE-TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_MARMS (Betaine aldehyde dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=betB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.070e-19 Identity = 56/176 (31.82%), Postives = 94/176 (53.41%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSG-DLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 Y G + S SG+ +NP T V+ Q E++ +E+AK QK+W+ +R +L KAA +L+E+ +A V + KP ++A+ I++G D++ Y A +I G+ + L + +F T + PLG+ I +NYP+ +A+ K PAL AGN+++ KP Sbjct: 7 YIHGRYHASTSGEHFETINPATGEVIATVEHAGQAELDAAVESAKQGQKVWSAMSPVERGRILKKAAELLRENNEELARLEVLDTGKPLQEAIVVDIQTGADVIEYYAGLTDKIQGDYQDLGNGNF--------FYTRREPLGICAGIGAWNYPIQIAMWKSGPALAAGNAMIFKP 174
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEMY (Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.010e-19 Identity = 57/176 (32.39%), Postives = 91/176 (51.70%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 Y G++ ++SG++ +NP T KVQ SQ +V++ + +A QK+WA +R+ +L +A IL+E +AE + KP + +++ D++ Y A I GE L SF T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 10 YIGGQYVAASSGQTFDSINPATGEVLAKVQRASQADVDRAVASAAEGQKVWAAMTAMQRSRILRRAVDILRERNDELAELETLDTGKPLSETRYVDIVTGADVLEYYAGLIPAIEGEQIPLRESSF--------VYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus kaustophilus GN=iolA1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.840e-19 Identity = 54/179 (30.17%), Postives = 94/179 (52.51%), Query Frame = 2 Query: 86 VFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 V K Y G+W S+ +++ + NP T +V ++E+V++ ++AAK A W P+ KRA ++ +L +H +AE +V+E K K+A E+ R + V + A ++GE +++ +E +Y PLGV I PFN+P+ + + A++ GN+ VLKP Sbjct: 10 VLKNYIGGQWVASSGTETLEVPNPATGEVLARVPISTKEDVDQAVQAAKKAFATWKDVPVPKRARIMFSFHHLLNQHHEELAELVVQENGKAYKEAYGEIQRGIECVEFAAGAPTLLMGESLSNIAEEI-DSEMFRY------PLGVVAGITPFNFPMMVPLWMFPLAIVCGNTFVLKP 181
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18 Identity = 59/180 (32.78%), Postives = 89/180 (49.44%), Query Frame = 2 Query: 86 VFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 V + Y G+ + SGK+ VNP T +VQ SQ +V + +++A QK+WA +R+ +L +A IL+E +A + K + T +++ D+V Y A I G L SF T + PLGV I +NYP+ +A+ K APAL AGN++V KP Sbjct: 6 VQQLYIHGQRVDATSGKTFKTVNPATGEVIAEVQVASQADVERAVQSASEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPLRESSF--------FYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_KLEP3 (Betaine aldehyde dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18 Identity = 52/176 (29.55%), Postives = 93/176 (52.84%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 Y +G + + SG++ +NP T VQA +E+V++ +E+A+ QK+WA +R+ +L +A +L++ +A + KP ++ A +++ D++ Y A G L P + + + T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 10 YINGGYTSATSGRTFETINPATGEVLATVQAAGREDVDRAVESAQRGQKIWAAMTAMERSRILRRAVDLLRQRNDELARLETLDTGKPLSETAAVDIVTGADVLEYYA-------GLIPALEGSQIPLRD-SSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177 The following BLAST results are available for this feature:
BLAST of CF503908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503908 ID=CF503908; Name=CF503908; organism=Citrus sinensis; type=EST; length=629bpback to top |