CF503908

Overview
NameCF503908
Unique NameCF503908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA_BACSU (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus subtilis GN=iolA PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 50/177 (28.25%), Postives = 85/177 (48.02%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            K Y +GEW +S + +   +VNP T+    +V   ++E+++   + A  A K W+K  + +RA +L     +L +HK  +A  +  E  K  K+A+ EV R  + V + A       G    ++ DS             + P+GV   I PFN+P+ +       A+  GN+ +LKP
Sbjct:    8 KNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAA-------GAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA_BACCQ (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain Q1) GN=iolA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V K +EAAKAA + W+K P+  R+  L+K   +L+E+K  +A+ +  E  K   DA  EV R  + V         ++G+    ++    G+         + P+GV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPNIASGIDGS-------IWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA_BACC7 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain AH187) GN=iolA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V K +EAAKAA + W+K P+  R+  L+K   +L+E+K  +A+ +  E  K   DA  EV R  + V         ++G+    ++    G+         + P+GV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPNIASGIDGS-------IWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA_BACC1 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain ATCC 10987) GN=iolA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V K +EAAKAA + W+K P+  R+  L+K   +L+E+K  +A+ +  E  K   DA  EV R  + V         ++G+    ++    G+         + P+GV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPNIASGIDGS-------IWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA1_BACHK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus thuringiensis subsp. konkukian GN=iolA1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V K +EAAKAA + W+K P+  R+  L+K   +L+E+K  +A+ +  E  K   DA  EV R  + V         ++G+    ++    G+         + P+GV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSAPNLMMGQALPNIASGIDGS-------IWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA1_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus cereus (strain ZK / E33L) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V K +EAAKAA + W+K P+  R+  L+K   +L+E+K  +A+ +  E  K   DA  EV R  + V         ++G+    ++    G+         + P+GV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPNIASGIDGS-------IWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA1_BACAN (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus anthracis GN=iolA1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V K +EAAKAA + W+K P+  R+  L+K   +L+E+K  +A+ +  E  K   DA  EV R  + V         ++G+    ++    G+         + P+GV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSAPNLMMGQALPNIASGIDGS-------IWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA1_BACAH (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus thuringiensis (strain Al Hakam) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V K +EAAKAA + W+K P+  R+  L+K   +L+E+K  +A+ +  E  K   DA  EV R  + V         ++G+    ++    G+         + P+GV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPNIASGIDGS-------IWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 54/182 (29.67%), Postives = 90/182 (49.45%), Query Frame = 2
Query:   98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAE-----EGVRI-LGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            Y  G +  +  G +  +VNP T      V     ++++  +++AKA Q+ WA   + +R+ +L +A A+L+E    +AE       KP  +    +++   D++ Y A      +GV++ L EG F                T   PLGV  AI  +NYP+ +A+ K APAL AGN+++ KP
Sbjct:   10 YIGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAGQRHWAALTVVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQGVQVPLREGSFF--------------YTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 54/182 (29.67%), Postives = 90/182 (49.45%), Query Frame = 2
Query:   98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAE-----EGVRI-LGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            Y  G +  +  G +  +VNP T      V     ++++  +++AKA Q+ WA   + +R+ +L +A A+L+E    +AE       KP  +    +++   D++ Y A      +GV++ L EG F                T   PLGV  AI  +NYP+ +A+ K APAL AGN+++ KP
Sbjct:   10 YIGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAGQRHWAALTVVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQGVQVPLREGSFF--------------YTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKP 177          
The following BLAST results are available for this feature:
BLAST of CF503908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
IOLA_BACSU3.177e-1628.25Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACCQ3.177e-1629.55Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC73.177e-1629.55Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC13.177e-1629.55Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACHK3.177e-1629.55Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACCZ3.177e-1629.55Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACAN3.177e-1629.55Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACAH3.177e-1629.55Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_XANCP3.177e-1629.67Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANCB3.177e-1629.67Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-395 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503908 ID=CF503908; Name=CF503908; organism=Citrus sinensis; type=EST; length=629bp
CTTCTTCAACTAGTTTACTCTGTTGGGTGGTTCATTGTGAGAAATGGCTG
GCAATGGTATTTTTGCTGAGATTTTAGATGGGGACGTGTTCAAGTACTAT
GCTGATGGCGAATGGAAGAAGTCTAATTCTGGCAAAAGCGTTCCCATTGT
CAACCCCACTACTCGCAGAACTCACTACAAAGTTCAGGCTTGTTCACAAG
AGGAGGTGAACAAGGTAATGGAAGCAGCAAAAGCTGCACAAAAATTATGG
GCAAAGACTCCGCTTTGGAAGAGAGCTGAGCTCCTGCACAAGGCTGCTGC
AATTCTCAAAGAGCACAAGGCCCCCATTGCTGAGTGTTTGGTTAAAGAAA
TTGCAAAGCCAGCTAAAGATGCTGTCACTGAGGTTATAAGGTCTGGAGAT
TTGGTCTCTTATTGTGCCGAAGAGGGTGTTCGGATTCTCGGAGAAGGGAA
GTTTTTGGTGTCTGATAGCTTCCCCGGAAATGAGAGGACTAAGTATTGTC
TCACTTCAAAGATTCCACTTGGTGTGGGTTTGGCCATTCCACCGTTCAAC
TATCCAGTCAATCTTGCCGTTTCCAAAATTGCTCCTGCACTGATTGCTGG
AAATTCCCTTGTGCTTAAGCCTCCTACTC
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