CF503908

Overview
NameCF503908
Unique NameCF503908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA_BACCN (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=iolA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 51/176 (28.98%), Postives = 88/176 (50.00%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V + +EAAK A + W+K P+  R+ +L+K   +L+E+K  +++ +  E  K  KDA  EV R  + V         ++G+    ++    G+         + PLGV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVERAVEAAKNAYETWSKVPVPNRSRMLYKYLQLLQENKDELSKIITLENGKTLKDASGEVQRGIEAVELATSAPNLMMGQALPNIAGGIDGS-------IWRYPLGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA_BACC4 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain B4264) GN=iolA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V K +EAAKAA + W+K P+  R+  L+K   +L+E+K  +A+ +  E  K   DA  EV R  + V         ++G+    ++    G+         + P+GV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAFETWSKVPVPNRSRNLYKYLQLLQENKDELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPNIASGIDGS-------IWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA_BACC2 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain G9842) GN=iolA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            K + +GEW +S   +   + NP T +    V    +E+V K +EAAKAA + W+K P+  R+  L+K   +L+E+K  +A+ +  E  K   DA  EV R  + V         ++G+    ++    G+         + P+GV   I PFN+P+ + +     A+  GN+ VLK
Sbjct:   10 KNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAFETWSKVPVPNRSRNLYKYLQLLQENKDELAKIITLENGKTLTDATGEVQRGIEAVELATSAPNLMMGQALPNIASGIDGS-------IWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            Y  G +  +  G +  +VNP T      V     ++++  +++A+A Q+ WA     +R+ +L +A A+L+E    +AE       KP  +    +V+   D++ Y A       G  + L     P  E + +  T   PLGV  AI  +NYP+ +A+ K APAL AGN+++ KP
Sbjct:   10 YIGGRYVPARGGHTFEVVNPATGEVLANVHNAGADDLDAAVDSAQAGQRQWAALTTVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDVVTGADVLEYYA-------GVAQALQGAQVPLREGS-FFYTRHEPLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_VIBSL (Betaine aldehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=betB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 53/176 (30.11%), Postives = 89/176 (50.57%), Query Frame = 2
Query:   98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSG-DLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            Y DG+   + SG++   +NP        +   S  +V   +E+AK    +W+     +R+ +L KA  IL+     +A   V +  KP ++A+   + SG D++ Y A       G    L  D  P ++ T++  T + PLG+   I  +NYP+ +A+ K APAL AGN+++ KP
Sbjct:    7 YIDGKAVDATSGETFVSINPANGEPIATLGQASSADVENAIESAKRGFAVWSAMTAVERSRILLKAVEILRARNNDLANLEVVDTGKPLQEAIEVDVASGADVIEYFA-------GLAPTLQGDQQPLSD-TQFFYTRREPLGICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKP 174          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_VIBHB (Betaine aldehyde dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=betB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 2
Query:   83 DVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            D+  +Y DG      S +     NP        V+  +Q+++   +E+AK    +W+     +R+ +L KA A+L+E    +A   V +  KP ++A   ++    D++ Y A     + GE +       P NE +++  T + PLG+   I  +NYP+ +A+ K APAL AGN+++ KP
Sbjct:    2 DMKAHYIDGAMHLGCSEEHFTTYNPANGEPLANVKQANQQDMQAAIESAKRGFAIWSAMTATERSRILLKAVALLRERNDELAALEVADTGKPIQEANCVDIATGADVIEYYAGLAPSMHGEQQ-------PLNE-SQFFYTRREPLGICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKP 174          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEU2 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=betB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 51/178 (28.65%), Postives = 88/178 (49.44%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            K Y DG +  +++ ++   +NP       ++Q   +++V + + AA+  QK+WA     +R+ +L +A  IL+E    +A     +  K   +    +++   D++ Y A     I GE   L   SF          T + PLGV   I  +NYP+ +A+ K APAL AGN+++ KP
Sbjct:    8 KLYIDGGYVDASNPETFDAINPANGEVLAQIQRAGKDDVERAVVAAEKGQKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGKAISETRYVDIVTGADVLEYYAGLVPAIEGEQIPLRDSSF--------VYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: ALDH5_BACSU (Putative aldehyde dehydrogenase yfmT OS=Bacillus subtilis GN=yfmT PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 52/177 (29.38%), Postives = 93/177 (52.54%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            K +  G+W++ +S   +   NP T++T    +  + ++V++   AA  A+K W     +++  +L KA   ++E++  I   +++E+      A  E+    +++   A   +R+  EGK L S +  G E   Y    ++P GV   I PFN+P  L++  +APAL AGN +VLKP
Sbjct:    9 KQFIGGKWQEGSSPNVLENKNPYTQKTFTTFRKATADDVDEAYRAAALAKKKWDAVNPFEKRTILEKAVTYIEENEEAIIYLIMEELGGTRLKAAFEIGLVKNIIKEAATFPIRM--EGKILPS-TIDGKENRLY----RVPAGVVGVISPFNFPFFLSMKSVAPALGAGNGVVLKP 178          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: GABD_RHISN (Probable succinate-semialdehyde dehydrogenase [NADP+] OS=Rhizobium sp. (strain NGR234) GN=gabD PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15
Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 2
Query:  146 IVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + NP+T     +V      + +  +E A AAQ+ W+      R+++L K    + EH   +A  L  E+ KP  +A +EV  +   + + AEE  RI GE     + S P  +R    L  K P+GV  AI P+N+P ++   KI+PAL AG ++VLKP
Sbjct:   37 VFNPSTGELLAEVPDMGAADAHAAIERADAAQEPWSGLTARARSDILWKWHRFILEHSDDLAAILTAEMGKPLGEAKSEVQHAAAYLQWYAEEANRIYGE-----TISAPSTDRR--MLVIKQPIGVVGAITPWNFPASMVARKISPALAAGCTVVLKP 188          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15
Identity = 59/184 (32.07%), Postives = 94/184 (51.09%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKL---WAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA----VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            K + + EW +S SGK     NP+TR    +V+   + +V+K +EAA+ A +    W +     R  LLH+ A +++  +A +A     +  KP   A    +   IR+   + Y A    +I  +GK + +D          C T   P+GV  AI P+N+P+ + V K+APAL  GN++VLKP
Sbjct:   33 KIFINNEWHESKSGKKFATCNPSTREQICEVEEGDKPDVDKAVEAAQVAFQRGSPWRRLDALSRGRLLHQLADLVERDRATLAALETMDTGKPFLHAFFIDLEGCIRT---LRYFAGWADKI--QGKTIPTDD------NVVCFTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTMVLKP 205          
The following BLAST results are available for this feature:
BLAST of CF503908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
IOLA_BACCN9.245e-1628.98Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC49.245e-1629.55Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC29.245e-1629.55Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_XANC59.245e-1629.55Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_VIBSL9.245e-1630.11Betaine aldehyde dehydrogenase OS=Vibrio splendidu... [more]
BETB_VIBHB9.245e-1628.73Betaine aldehyde dehydrogenase OS=Vibrio harveyi (... [more]
BETB_PSEU29.245e-1628.65Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
ALDH5_BACSU9.245e-1629.38Putative aldehyde dehydrogenase yfmT OS=Bacillus s... [more]
GABD_RHISN1.207e-1533.96Probable succinate-semialdehyde dehydrogenase [NAD... [more]
AL1A3_HUMAN1.207e-1532.07Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-395 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503908 ID=CF503908; Name=CF503908; organism=Citrus sinensis; type=EST; length=629bp
CTTCTTCAACTAGTTTACTCTGTTGGGTGGTTCATTGTGAGAAATGGCTG
GCAATGGTATTTTTGCTGAGATTTTAGATGGGGACGTGTTCAAGTACTAT
GCTGATGGCGAATGGAAGAAGTCTAATTCTGGCAAAAGCGTTCCCATTGT
CAACCCCACTACTCGCAGAACTCACTACAAAGTTCAGGCTTGTTCACAAG
AGGAGGTGAACAAGGTAATGGAAGCAGCAAAAGCTGCACAAAAATTATGG
GCAAAGACTCCGCTTTGGAAGAGAGCTGAGCTCCTGCACAAGGCTGCTGC
AATTCTCAAAGAGCACAAGGCCCCCATTGCTGAGTGTTTGGTTAAAGAAA
TTGCAAAGCCAGCTAAAGATGCTGTCACTGAGGTTATAAGGTCTGGAGAT
TTGGTCTCTTATTGTGCCGAAGAGGGTGTTCGGATTCTCGGAGAAGGGAA
GTTTTTGGTGTCTGATAGCTTCCCCGGAAATGAGAGGACTAAGTATTGTC
TCACTTCAAAGATTCCACTTGGTGTGGGTTTGGCCATTCCACCGTTCAAC
TATCCAGTCAATCTTGCCGTTTCCAAAATTGCTCCTGCACTGATTGCTGG
AAATTCCCTTGTGCTTAAGCCTCCTACTC
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