CF503908

Overview
NameCF503908
Unique NameCF503908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: ROCA_BACWK (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=rocA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15
Identity = 52/171 (30.41%), Postives = 86/171 (50.29%), Query Frame = 2
Query:  116 KKSNSGKSVPIVNPTTRRTHY-KVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNER-TKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            +K  +   +  VNP  +     +V   S+E   K M+ A A  + W K+    RA++L +AAAI++  K   +  LVKE  KP  +A  +   + D + Y A + +++         D  P   R  +Y   S IPLGVG+ I P+N+P  +       A+++GN+++LKP
Sbjct:   44 EKITTEDKIVSVNPANKEELVGRVSKASRELAEKAMQVADATFQTWRKSKPEMRADILFRAAAIVRRRKHEFSAILVKEAGKPWNEADADTAEAIDFMEYYARQMLKL--------KDGMPVESRPIEYNRFSYIPLGVGVIISPWNFPFAIMAGMTTAAVVSGNTVLLKP 206          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: MMSA_AEDAE (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15
Identity = 45/177 (25.42%), Postives = 91/177 (51.41%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            K + DG++  S + + + + +P T +   +V  C+Q+E+   +E++K A K W++T +  R +++ K   +++ + + +A+ + KE  K   DA  +V+R   +V +C       +GE       + P   +     +  +PLGV   I PFN+P  + +     A+  GN+ ++KP
Sbjct:   28 KMFIDGKFVDSKTTEWIDLHDPATNKVVTRVPKCTQDEMESAVESSKKAFKTWSQTSILGRQQVMFKLQHLIRNNMSELAKNITKEQGKTLVDAEGDVLRGLQVVEHCCSITSLQMGE-------TVPNIAKDMDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKP 197          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: ASTD_PSEPK (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=astD PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15
Identity = 52/176 (29.55%), Postives = 88/176 (50.00%), Query Frame = 2
Query:   95 YYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            +Y  G W+ +  G+++  +NP T+   ++ Q     +V+  ++AA+ A   WA+  L  R ++L K AA LK H   +A+C+ +E  KP  ++ TEV    + V+   +      GE    ++D+          +    P GV     P+N+P +L    I PAL+AGN +V KP
Sbjct:    4 HYIAGNWQ-AGQGETLQSLNPVTQAVIWQGQGADASQVDAAVQAARQAFPAWAQLSLEARIDVLEKFAAQLKVHAEAMAQCIGEETGKPLWESATEVTSMINKVAISVQSYRERTGEKSGPLADA--------TAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKP 170          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: ASTD_PSEP1 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=astD PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15
Identity = 52/176 (29.55%), Postives = 88/176 (50.00%), Query Frame = 2
Query:   95 YYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            +Y  G W+ +  G+++  +NP T+   ++ Q     +V+  ++AA+ A   WA+  L  R ++L K AA LK H   +A+C+ +E  KP  ++ TEV    + V+   +      GE    ++D+          +    P GV     P+N+P +L    I PAL+AGN +V KP
Sbjct:    4 HYIAGNWQ-AGQGETLQSLNPVTQAVIWQGQGADASQVDTAVQAARQAFPAWAQLSLEARIDVLEKFAAQLKVHAEAMAQCIGEETGKPLWESATEVTSMINKVAISVQSYRERTGEKSGPLADA--------TAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKP 170          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA2_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus cereus (strain ZK / E33L) GN=iolA2 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.060e-15
Identity = 59/179 (32.96%), Postives = 88/179 (49.16%), Query Frame = 2
Query:   86 VFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + K Y  GEW +S S K   + NP T     +V   ++ +V + + AA  A K W+KT + KRA +L K   +L ++   +A+ +  E  K   +A  EV+R  + V + A  G   L  GK L  D   G E   Y    + P+GV   I PFN+P+ +       A+  GN+ VLKP
Sbjct:    9 IVKNYIGGEWVESISTKMEAVYNPATGEVIAQVPLSTKVDVEQAVSAANEAFKSWSKTAVPKRARILFKYQQLLVDNWEELAKLITIENGKSYNEAYGEVLRGIECVEFAA--GAPTLMMGKQL-PDIATGIESGMY----RYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKP 180          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: MMSA_ANOGA (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Anopheles gambiae GN=AGAP002499 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.690e-15
Identity = 45/177 (25.42%), Postives = 89/177 (50.28%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            K + DG++ +S +   + + +P T     +V  C+Q+E+   +E++K A K W ++ +  R +++ K   I++ + + +A+ + KE  K   DA  +V+R   +V +C       +GE       + P   +     +  +PLGV   I PFN+P  + +     A+  GN+ ++KP
Sbjct:   28 KMFIDGKFVESKTNDWIDLHDPATNEVVTRVPKCTQDEMQTAVESSKKAYKTWRQSSILSRQQVMLKLQHIIRNNMSELAKNITKEQGKTLIDAEGDVLRGLQVVEHCCSITSLQMGE-------TVPNIAKDMDTYSYHLPLGVTAGIAPFNFPAMIPLWMFPVAITCGNTSIIKP 197          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA_BACP2 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus pumilus (strain SAFR-032) GN=iolA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.690e-15
Identity = 56/182 (30.77%), Postives = 92/182 (50.55%), Query Frame = 2
Query:   77 DGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            D  + K Y  G+W ++ + ++  + NP T +   +V   ++++V + ++AA+ A   W+KTP+ +RA +L K   +L +    +AE +  E  K   +A  EV R  + V + A  G   L  GK L  D   G E   Y    + P+GV   I PFN+P+ +       A+  GN+ VLKP
Sbjct:    5 DVQMLKNYIGGQWIEAETSQTEAVYNPATGKIIAEVPLSTKKDVERAVQAAQEAFTTWSKTPVPRRARILFKYQQLLVDKWDELAELVTMENGKSITEAKGEVQRGIECVEFAA--GAPTLMMGKQL-PDIASGLESGMY----RYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKP 179          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_CHRSD (Betaine aldehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.690e-15
Identity = 53/176 (30.11%), Postives = 87/176 (49.43%), Query Frame = 2
Query:   98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            Y  G    + SG++  + NP        +   SQ +V+  ++AA+  Q+ WA     +R+ +L +A A+L+E    +AE   +   KP ++ A  +++   D + Y A       G    +     P  + T+   T + PLGV  AI  +NYP+ +A  K APAL AGN++V KP
Sbjct:   10 YIGGRPVDATSGETFTVTNPYDGSLLATIGQASQADVDSAVQAAQRGQREWAAMTGMERSRILLRAVALLRERNDELAELETRNTGKPISETASVDIVTGADALEYYA-------GLAPAIEGSQIPLRD-TRLVYTRREPLGVIGAIGAWNYPIQIACWKAAPALAAGNAIVFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BADH_ORYSJ (Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.690e-15
Identity = 57/180 (31.67%), Postives = 90/180 (50.00%), Query Frame = 2
Query:   98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAA-----QKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            +  G W++ + G+ +P+VNP T  T   + A + E+V   + AA+ A      + W++ P   RA+ L   AA +K+ K+ +A     +  KP  +A  ++        Y A+    +  +GK     S P      Y L  K P+GV   I P+NYP+ +A  K+APAL AG + VLKP
Sbjct:   13 FIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHWSRAPGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACFEYYADLAEAL--DGKQRAPISLPMENFESYVL--KEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKP 188          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BADH_AMAHP (Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus GN=BADH4 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.690e-15
Identity = 57/183 (31.15%), Postives = 87/183 (47.54%), Query Frame = 2
Query:   98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKL-----WAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVS---DSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + DGEW++      +PI+NP+T      + A + E+V   + AA+ A K      WA      RA+ L   AA + E K   A+    +  KP  +A  ++        Y A++   +  + K  ++   D+F        C   K P+GV   I P+NYP+ +A  K+APAL AG S VLKP
Sbjct:   11 FIDGEWREPIKKNRIPIINPSTEEIIGDIPAATAEDVELAVAAARRALKRNKGEDWASASGAHRAKYLRAIAAKITEKKDYFAKLEAMDCGKPLDEAARDIDDVAGCFEYYADQAEALDAKQKAPIALPMDTFK-------CHVLKQPIGVVGLISPWNYPLLMATWKVAPALAAGCSAVLKP 186          
The following BLAST results are available for this feature:
BLAST of CF503908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
ROCA_BACWK1.577e-1530.411-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
MMSA_AEDAE1.577e-1525.42Probable methylmalonate-semialdehyde dehydrogenase... [more]
ASTD_PSEPK1.577e-1529.55N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_PSEP11.577e-1529.55N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
IOLA2_BACCZ2.060e-1532.96Methylmalonate semialdehyde dehydrogenase [acylati... [more]
MMSA_ANOGA2.690e-1525.42Probable methylmalonate-semialdehyde dehydrogenase... [more]
IOLA_BACP22.690e-1530.77Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_CHRSD2.690e-1530.11Betaine aldehyde dehydrogenase OS=Chromohalobacter... [more]
BADH_ORYSJ2.690e-1531.67Betaine aldehyde dehydrogenase OS=Oryza sativa sub... [more]
BADH_AMAHP2.690e-1531.15Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-395 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503908 ID=CF503908; Name=CF503908; organism=Citrus sinensis; type=EST; length=629bp
CTTCTTCAACTAGTTTACTCTGTTGGGTGGTTCATTGTGAGAAATGGCTG
GCAATGGTATTTTTGCTGAGATTTTAGATGGGGACGTGTTCAAGTACTAT
GCTGATGGCGAATGGAAGAAGTCTAATTCTGGCAAAAGCGTTCCCATTGT
CAACCCCACTACTCGCAGAACTCACTACAAAGTTCAGGCTTGTTCACAAG
AGGAGGTGAACAAGGTAATGGAAGCAGCAAAAGCTGCACAAAAATTATGG
GCAAAGACTCCGCTTTGGAAGAGAGCTGAGCTCCTGCACAAGGCTGCTGC
AATTCTCAAAGAGCACAAGGCCCCCATTGCTGAGTGTTTGGTTAAAGAAA
TTGCAAAGCCAGCTAAAGATGCTGTCACTGAGGTTATAAGGTCTGGAGAT
TTGGTCTCTTATTGTGCCGAAGAGGGTGTTCGGATTCTCGGAGAAGGGAA
GTTTTTGGTGTCTGATAGCTTCCCCGGAAATGAGAGGACTAAGTATTGTC
TCACTTCAAAGATTCCACTTGGTGTGGGTTTGGCCATTCCACCGTTCAAC
TATCCAGTCAATCTTGCCGTTTCCAAAATTGCTCCTGCACTGATTGCTGG
AAATTCCCTTGTGCTTAAGCCTCCTACTC
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