CF503908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: SSDH_ORYSJ (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18 Identity = 52/172 (30.23%), Postives = 84/172 (48.84%), Query Frame = 2 Query: 107 GEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 G+W + GK++ + NP T T V +E + + +A + W+K +R++ L K ++ HK +A + E KP K+A+ EV + Y AEE RI G D P + L K P+GV A+ P+N+P+ + K+ PAL G ++V+KP Sbjct: 60 GKWVDAYDGKTIEVQNPATGETLANVSCMGSKETSDAIASAHSTFYSWSKLTANERSKALRKWHDLIISHKEELALLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYG-------DIIPPTLSDRRLLVLKQPVGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKP 224
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEPG (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18 Identity = 55/178 (30.90%), Postives = 90/178 (50.56%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y DG + + S + +NP T VQ ++ +V K +E+A+ QK+WA +R+ +L +A IL+E +A+ + K ++ +++ D++ Y A I GE L SF T + PLGV + I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYIDGAYVDAGSDATFEAINPATGEVLAHVQRATEADVEKAVESAERGQKVWAAMTAMQRSRILRRAVDILRERNDELAQLETLDTGKSYSETRYVDIVTGADVLEYYAGLVPAIEGEQIPLRESSF--------VYTRREPLGVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18 Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 Y G + + SG++ +NP VQA +E+V++ +++A+ QK+WA +R+ +L +A IL+E +A+ + K + T +++ D++ Y A G L P E T + T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPALEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_ECOLC (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=betB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18 Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 Y G + + SG++ +NP VQA +E+V++ +++A+ QK+WA +R+ +L +A IL+E +A+ + K + T +++ D++ Y A G L P E T + T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPALEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_ECODH (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=betB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18 Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 Y G + + SG++ +NP VQA +E+V++ +++A+ QK+WA +R+ +L +A IL+E +A+ + K + T +++ D++ Y A G L P E T + T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPALEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_SHIF8 (Betaine aldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=betB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.877e-18 Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 Y G + + SG++ +NP VQA +E+V++ +++A+ QK+WA +R+ +L +A IL+E +A+ + K + T +++ D++ Y A G L P E T + T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPALEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEPW (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain W619) GN=betB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.877e-18 Identity = 56/178 (31.46%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y DG + + S + +NP T VQ +Q +V K +E+A+ QK+WA +R+ +L +A IL+E +A + K ++ +++ D++ Y A I GE L SF T + PLGV + I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYIDGGYVDAGSDATFEAINPATGEVLAHVQRATQADVEKAVESAERGQKIWAAMTAMQRSRILRRAVDILRERNDELAMLETLDTGKSYSETRYVDIVTGADVLEYYAGLVPAIEGEQIPLRESSF--------VYTRREPLGVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEE4 (Betaine aldehyde dehydrogenase OS=Pseudomonas entomophila (strain L48) GN=betB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.877e-18 Identity = 56/178 (31.46%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y DG + + S + +NP T VQ +Q +V K +E+A+ QK+WA +R+ +L +A IL+E +A + K ++ +++ D++ Y A I GE L SF T + PLGV + I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYIDGAYVDAGSDATFEAINPATGEVLAHVQRATQADVEKAVESAERGQKVWAAMTAMQRSRILRRAVDILRERNDELAMLETLDTGKSYSETRYVDIVTGADVLEYYAGLVPAIEGEQIPLRESSF--------VYTRREPLGVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_ECOSM (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=betB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.877e-18 Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 Y G + + SG++ +NP VQA +E+V++ +++A+ QK+WA +R+ +L +A IL+E +A+ + K + T +++ D++ Y A G L P E T + T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPALEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_ECOLU (Betaine aldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=betB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.877e-18 Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 Y G + + SG++ +NP VQA +E+V++ +++A+ QK+WA +R+ +L +A IL+E +A+ + K + T +++ D++ Y A G L P E T + T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNNELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPSLEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177 The following BLAST results are available for this feature:
BLAST of CF503908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503908 ID=CF503908; Name=CF503908; organism=Citrus sinensis; type=EST; length=629bpback to top |