CF503908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: ASTD_BURM1 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=astD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 49/175 (28.00%), Postives = 79/175 (45.14%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 + DG W + SG + NP T ++ + S +V++ + +A+ A W+ R + + AA+L E K +A + +E KP +A TEV V + GE + ++D + P GV P+N+P +L I PALIAGN++V KP Sbjct: 5 FIDGAWV-AGSGPAFASRNPGTDDIAWQGASASAADVDRAIMSARRAFADWSALDFESRCAIAKRFAALLNERKEALAAAIGRETGKPLWEARTEVAAMAAKVGISIQAYQERTGEKRQDMADG--------VAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKP 170
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: ASTD_SHEWM (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=astD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 48/175 (27.43%), Postives = 80/175 (45.71%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 + +G+W + G V NP + + + E+VN +EAA+ Q W R ++ L+EHKA +AE + +E KP + TE +G ++ + G+ + K + S + + P GV P+N+P +L I PAL+AGN++V KP Sbjct: 4 FINGQWV-AGLGHEVTSKNPANSEVIWSSKTATAEQVNTAVEAAREVQFDWFMLGFEGRLAIVEAYKTQLEEHKAEMAEVIAQETGKPQWETATE---AGAMI---GKIGLSVAAYNK--RTGSSENDTPAGRAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKP 169
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: ASTD_ECOSE (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=astD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 46/175 (26.29%), Postives = 83/175 (47.43%), Query Frame = 2 Query: 98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 + +G+W + G S NP + ++ +V + AA+AA WA+ L +R ++ + A +L+ +K + + +E KP +A TEV + ++ + GE + + D G ++C P GV P+N+P +L I PAL+AGN+++ KP Sbjct: 4 WINGDWI-TGQGASRVKRNPVSGEVLWQGNDADAAQVEQACRAARAAFPRWARLSLAERQVVVERFAGLLERNKGELTAIIARETGKPRWEAATEVTAMINKIAISIKAYHVRTGEQRSEMPD---GAASLRHC-----PHGVLAVFGPYNFPGHLPNGHIVPALLAGNTIIFKP 169 The following BLAST results are available for this feature:
BLAST of CF503908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503908 ID=CF503908; Name=CF503908; organism=Citrus sinensis; type=EST; length=629bpback to top |