CF503908

Overview
NameCF503908
Unique NameCF503908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURP6 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G    + SGK+    +P T     +VQ  S ++V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +AE  +++  KP A+    +++   D++ Y A     I G    L  +SF          T + PLGV   I  +NYP+ +A  K APAL AGN+++ KP
Sbjct:    8 RLYIAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNNALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESF--------VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G    + SGK+    +P T     +VQ  S ++V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +AE  +++  KP A+    +++   D++ Y A     I G    L  +SF          T + PLGV   I  +NYP+ +A  K APAL AGN+++ KP
Sbjct:    8 RLYIAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESF--------VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G    + SGK+    +P T     +VQ  S ++V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +AE  +++  KP A+    +++   D++ Y A     I G    L  +SF          T + PLGV   I  +NYP+ +A  K APAL AGN+++ KP
Sbjct:    8 RLYIAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESF--------VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURMS (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G    + SGK+    +P T     +VQ  S ++V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +AE  +++  KP A+    +++   D++ Y A     I G    L  +SF          T + PLGV   I  +NYP+ +A  K APAL AGN+++ KP
Sbjct:    8 RLYIAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESF--------VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURMA (Betaine aldehyde dehydrogenase OS=Burkholderia mallei GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G    + SGK+    +P T     +VQ  S ++V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +AE  +++  KP A+    +++   D++ Y A     I G    L  +SF          T + PLGV   I  +NYP+ +A  K APAL AGN+++ KP
Sbjct:    8 RLYIAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESF--------VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURM9 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G    + SGK+    +P T     +VQ  S ++V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +AE  +++  KP A+    +++   D++ Y A     I G    L  +SF          T + PLGV   I  +NYP+ +A  K APAL AGN+++ KP
Sbjct:    8 RLYIAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESF--------VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURM7 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G    + SGK+    +P T     +VQ  S ++V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +AE  +++  KP A+    +++   D++ Y A     I G    L  +SF          T + PLGV   I  +NYP+ +A  K APAL AGN+++ KP
Sbjct:    8 RLYIAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESF--------VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.874e-17
Identity = 63/182 (34.62%), Postives = 92/182 (50.55%), Query Frame = 2
Query:   98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQ-----KLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAE--EGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + DGEW++    K +PIVNP T      + A + E+V+  + AA+ A      K WAK P   RA+ L   AA + E K  +A+    +  KP  +AV ++        + A+  EG+    + K     S P      Y L  K PLGV   I P+NYP+ +AV K+AP+L AG + +LKP
Sbjct:   11 FIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAKAPGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDMDDVAGCFEFYADLAEGL----DAKQKAPVSLPMESFKSYVL--KQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKP 186          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_VIBVU (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus GN=betB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.753e-17
Identity = 52/181 (28.73%), Postives = 94/181 (51.93%), Query Frame = 2
Query:   83 DVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            +V  +Y  G+    ++G+S   +NP T      ++   +  +   +E+AK    +W+     +R+  L KAA ++++H   +AE  V++  KP ++A V ++    D++ Y A     + GE + L S+ F          T + PLG+   I  +NYP+ +A+ K APAL AGN+++ KP
Sbjct:    2 EVTAHYIGGKPFVGDTGESFATLNPATGEVLAHIEQADERVLGHAIESAKLGFSVWSSMSAAERSRCLLKAAQLIRDHNDELAELEVRDTGKPIQEASVVDIATGADVIEYFAGLVNGLGGEQQSLGSNQF--------FYTRREPLGICAGIGAWNYPIQIAMWKAAPALAAGNAMIFKP 174          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOTN (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=iolA1 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.902e-17
Identity = 59/177 (33.33%), Postives = 90/177 (50.85%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            K Y  G+W +S S K+  + NP T      V   ++E++++ + AAK A K W+KTP+ +RA +L K   +L EH   +A  +  E  K   +A  E+ R  + V + A  G   L  G+ L S +  G E   Y    + P+GV   I PFN+P+ +       A+  GN+ VLKP
Sbjct:    9 KNYIGGQWVESRSAKTEAVPNPATGEVLAYVPISTREDLDRAVAAAKEAFKTWSKTPVPRRARILFKYQQLLVEHWEELARLVTLENGKSYNEAYGEIQRGIECVEFAA--GAPTLMMGRQLPSIA-TGIESGMY----RYPIGVVGGITPFNFPMMVPCWMFPLAIACGNTFVLKP 178          
The following BLAST results are available for this feature:
BLAST of CF503908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
BETB_BURP62.200e-1729.78Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP12.200e-1729.78Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP02.200e-1729.78Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURMS2.200e-1729.78Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURMA2.200e-1729.78Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM92.200e-1729.78Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM72.200e-1729.78Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BADH1_ARATH2.874e-1734.62Betaine aldehyde dehydrogenase 1, chloroplastic OS... [more]
BETB_VIBVU3.753e-1728.73Betaine aldehyde dehydrogenase OS=Vibrio vulnificu... [more]
IOLA1_GEOTN4.902e-1733.33Methylmalonate semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-395 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503908 ID=CF503908; Name=CF503908; organism=Citrus sinensis; type=EST; length=629bp
CTTCTTCAACTAGTTTACTCTGTTGGGTGGTTCATTGTGAGAAATGGCTG
GCAATGGTATTTTTGCTGAGATTTTAGATGGGGACGTGTTCAAGTACTAT
GCTGATGGCGAATGGAAGAAGTCTAATTCTGGCAAAAGCGTTCCCATTGT
CAACCCCACTACTCGCAGAACTCACTACAAAGTTCAGGCTTGTTCACAAG
AGGAGGTGAACAAGGTAATGGAAGCAGCAAAAGCTGCACAAAAATTATGG
GCAAAGACTCCGCTTTGGAAGAGAGCTGAGCTCCTGCACAAGGCTGCTGC
AATTCTCAAAGAGCACAAGGCCCCCATTGCTGAGTGTTTGGTTAAAGAAA
TTGCAAAGCCAGCTAAAGATGCTGTCACTGAGGTTATAAGGTCTGGAGAT
TTGGTCTCTTATTGTGCCGAAGAGGGTGTTCGGATTCTCGGAGAAGGGAA
GTTTTTGGTGTCTGATAGCTTCCCCGGAAATGAGAGGACTAAGTATTGTC
TCACTTCAAAGATTCCACTTGGTGTGGGTTTGGCCATTCCACCGTTCAAC
TATCCAGTCAATCTTGCCGTTTCCAAAATTGCTCCTGCACTGATTGCTGG
AAATTCCCTTGTGCTTAAGCCTCCTACTC
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