CF503908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: GABD_BACSU (Succinate-semialdehyde dehydrogenase [NADP+] OS=Bacillus subtilis GN=gabD PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 2 Query: 146 IVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 + NP T + S EV + +E + A K W+KT +R LL K ++ EHK +A+ + KE KP ++AV EV+ + + AEE R+ G + P K + ++ P+G AI P+N+P + K APAL AG + ++KP Sbjct: 7 VYNPATGEEIKTIPQQSATEVEEAIERSHQAFKTWSKTSANERTSLLKKWYELIVEHKEELADLITKENGKPYQEAVGEVLYGAGYIEWFAEEAKRVYGR-------TVPAPTTGKRIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAAGCTFIIKP 158
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y +G + S SG + VNP ++QA + ++V+K + AAK Q +WA +R+ +L +A IL++ +A + KP + +++ D++ Y A + G+ L +F T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAF--------VYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_YERPP (Betaine aldehyde dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=betB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y +G + S SG + VNP ++QA + ++V+K + AAK Q +WA +R+ +L +A IL++ +A + KP + +++ D++ Y A + G+ L +F T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAF--------VYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_YERPN (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=betB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y +G + S SG + VNP ++QA + ++V+K + AAK Q +WA +R+ +L +A IL++ +A + KP + +++ D++ Y A + G+ L +F T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAF--------VYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y +G + S SG + VNP ++QA + ++V+K + AAK Q +WA +R+ +L +A IL++ +A + KP + +++ D++ Y A + G+ L +F T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAF--------VYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_YERPB (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=betB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y +G + S SG + VNP ++QA + ++V+K + AAK Q +WA +R+ +L +A IL++ +A + KP + +++ D++ Y A + G+ L +F T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAF--------VYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_YERPA (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=betB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y +G + S SG + VNP ++QA + ++V+K + AAK Q +WA +R+ +L +A IL++ +A + KP + +++ D++ Y A + G+ L +F T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAF--------VYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_YERP3 (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y +G + S SG + VNP ++QA + ++V+K + AAK Q +WA +R+ +L +A IL++ +A + KP + +++ D++ Y A + G+ L +F T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYINGAYTDSASGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAF--------VYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16 Identity = 52/178 (29.21%), Postives = 88/178 (49.44%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 K Y DG + + S + +NP +VQ ++E+V + + +A+ QK+WA +R+ +L +A IL+E +A + K ++ +++ D++ Y A I GE L T + T + PLGV I +NYP+ +A+ K APAL AGN+++ KP Sbjct: 8 KLYIDGGYTDAGSDATFDAINPANGEVLAQVQRATKEDVERAVVSAEKGQKIWAAMTAMERSRILRRAVEILRERNDELAALETLDTGKAFSETKYVDIVTGADVLEYYAGLVPAIEGEQIPL--------RTTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16 Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622 + Y G + + SGK+ +P T +VQ S +V++ + +A+ Q+ WA +R+ +L +A +L+E +A ++ KP + + +++ D++ Y A I G L ++SF T + PLGV I +NYP+ +A K APAL AGN++V KP Sbjct: 8 RLYIGGAYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQQGQREWAALTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESF--------VYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKP 177 The following BLAST results are available for this feature:
BLAST of CF503908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 413
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503908 ID=CF503908; Name=CF503908; organism=Citrus sinensis; type=EST; length=629bpback to top |