CF503908

Overview
NameCF503908
Unique NameCF503908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16
Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G +  + SGK+    +P T     +VQ  S  +V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +A    ++  KP  + +  +++   D++ Y A     I G    L ++SF          T + PLGV   I  +NYP+ +A  K APAL AGN++V KP
Sbjct:    8 RLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESF--------VYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURCH (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=betB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16
Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G +  + SGK+    +P T     +VQ  S  +V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +A    ++  KP  + +  +++   D++ Y A     I G    L ++SF          T + PLGV   I  +NYP+ +A  K APAL AGN++V KP
Sbjct:    8 RLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQREWAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESF--------VYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16
Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G +  + SGK+    +P T     +VQ  S  +V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +A    ++  KP  + +  +++   D++ Y A     I G    L ++SF          T + PLGV   I  +NYP+ +A  K APAL AGN++V KP
Sbjct:    8 RLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQREWAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESF--------VYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16
Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G +  + SGK+    +P T     +VQ  S  +V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +A    ++  KP  + +  +++   D++ Y A     I G    L ++SF          T + PLGV   I  +NYP+ +A  K APAL AGN++V KP
Sbjct:    8 RLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESF--------VYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 59/176 (33.52%), Postives = 93/176 (52.84%), Query Frame = 2
Query:   98 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFP-GNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLK 619
            Y +GEW KS   ++   V+P+      KV    ++E++  +++AK A K W K P  ++ ELL K A + ++H   +A     +  KP   +A  +V  +  L+ YCA    +I G+         P G E+  Y    + P+GV   I P+NYP+N+A  KIAPAL AGN +++K
Sbjct:   24 YINGEWHKS--AETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKTWKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQ-------VIPTGPEKLAYA--KRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIK 188          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_VIBPA (Betaine aldehyde dehydrogenase OS=Vibrio parahaemolyticus GN=betB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 53/177 (29.94%), Postives = 91/177 (51.41%), Query Frame = 2
Query:   95 YYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSG-DLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            +Y DG      S +     NP        ++  +Q ++   +E+AK   ++W+     +R+ +L+KA AIL+E    +A   V +  KP ++A+   I +G D++ Y A     + GE +       P NE  ++  T + PLG+   I  +NYP+ +A+ K APAL AGN+++ KP
Sbjct:    6 HYIDGAMYIGCSEEHFTTYNPANGEPLANIKQANQSDMEAAIESAKRGFEVWSAMTAIERSRILNKAVAILRERNDELAALEVADTGKPIQEAIAVDITTGADVIEYYAGLAPSLQGEQQ-------PLNE-NQFFYTRREPLGICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKP 174          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_PSEPF (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=betB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 52/178 (29.21%), Postives = 88/178 (49.44%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            K Y DG +  + S  +   +NP        VQ  ++E+V + + +A+  QK+WA     +R+ +L +A  IL+E    +A     +  K  ++    +++   D++ Y A     I GE         P  + T +  T + PLGV   I  +NYP+ +A+ K APAL AGN+++ KP
Sbjct:    8 KLYIDGAYSDAGSDATFEAINPANGEVLAHVQRATKEDVERAVVSAEKGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKAFSETKYVDIVTGADVLEYYAGLVPAIEGE-------QIPLRD-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURS3 (Betaine aldehyde dehydrogenase OS=Burkholderia sp. (strain 383) GN=betB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G +  + SGK+    +P T     +VQ  S  +V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +A    ++  KP  + +  +++   D++ Y A     I G    L ++SF          T + PLGV   I  +NYP+ +A  K APAL AGN++V KP
Sbjct:    8 RLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQREWAAMTAMQRSRILRRAVDLLRERNDELAALETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESF--------VYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURCJ (Betaine aldehyde dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G +  + SGK+    +P T     +VQ  S  +V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +A    ++  KP  + +  +++   D++ Y A     I G    L ++SF          T + PLGV   I  +NYP+ +A  K APAL AGN++V KP
Sbjct:    8 RLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQREWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESF--------VYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKP 177          
BLAST of CF503908 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   92 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVGLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 622
            + Y  G +  + SGK+    +P T     +VQ  S  +V++ + +A+  Q+ WA     +R+ +L +A  +L+E    +A    ++  KP  + +  +++   D++ Y A     I G    L ++SF          T + PLGV   I  +NYP+ +A  K APAL AGN++V KP
Sbjct:    8 RLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQREWATMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESF--------VYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKP 177          
The following BLAST results are available for this feature:
BLAST of CF503908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
BETB_BURCM1.863e-1629.21Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURCH1.863e-1629.21Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCA1.863e-1629.21Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURA41.863e-1629.21Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
YLX7_SCHPO2.433e-1633.52Putative aldehyde dehydrogenase-like protein C922.... [more]
BETB_VIBPA2.433e-1629.94Betaine aldehyde dehydrogenase OS=Vibrio parahaemo... [more]
BETB_PSEPF2.433e-1629.21Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_BURS32.433e-1629.21Betaine aldehyde dehydrogenase OS=Burkholderia sp.... [more]
BETB_BURCJ2.433e-1629.21Betaine aldehyde dehydrogenase OS=Burkholderia cep... [more]
BETB_BURCC2.433e-1629.21Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-395 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503908 ID=CF503908; Name=CF503908; organism=Citrus sinensis; type=EST; length=629bp
CTTCTTCAACTAGTTTACTCTGTTGGGTGGTTCATTGTGAGAAATGGCTG
GCAATGGTATTTTTGCTGAGATTTTAGATGGGGACGTGTTCAAGTACTAT
GCTGATGGCGAATGGAAGAAGTCTAATTCTGGCAAAAGCGTTCCCATTGT
CAACCCCACTACTCGCAGAACTCACTACAAAGTTCAGGCTTGTTCACAAG
AGGAGGTGAACAAGGTAATGGAAGCAGCAAAAGCTGCACAAAAATTATGG
GCAAAGACTCCGCTTTGGAAGAGAGCTGAGCTCCTGCACAAGGCTGCTGC
AATTCTCAAAGAGCACAAGGCCCCCATTGCTGAGTGTTTGGTTAAAGAAA
TTGCAAAGCCAGCTAAAGATGCTGTCACTGAGGTTATAAGGTCTGGAGAT
TTGGTCTCTTATTGTGCCGAAGAGGGTGTTCGGATTCTCGGAGAAGGGAA
GTTTTTGGTGTCTGATAGCTTCCCCGGAAATGAGAGGACTAAGTATTGTC
TCACTTCAAAGATTCCACTTGGTGTGGGTTTGGCCATTCCACCGTTCAAC
TATCCAGTCAATCTTGCCGTTTCCAAAATTGCTCCTGCACTGATTGCTGG
AAATTCCCTTGTGCTTAAGCCTCCTACTC
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