CF503915

Overview
NameCF503915
Unique NameCF503915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length380
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 5.792e-28
Identity = 49/84 (58.33%), Postives = 66/84 (78.57%), Query Frame = 3
Query:  117 PVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFT 368
            P+K   ++YLGRPWKE+SRT++M++ I D IDPAGW  WSGDFALKTLYY E++N GPG+  ++RVKWPG   +T P++A  +T
Sbjct:  464 PMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYT 546          

HSP 2 Score: 30.4166 bits (67), Expect = 5.792e-28
Identity = 13/31 (41.94%), Postives = 20/31 (64.52%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            KP   Q+ MVTAQGR++  ++TG  +  C +
Sbjct:  426 KPNKGQTCMVTAQGRSNVRESTGLVLHGCHI 456          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.792e-28
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 3
Query:  132 IRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            I+++LGRPWK++S TV+M+S +   I+P GW  W+GD A  T++Y EYLN GPGA T  RVKW G       +EA KFTV
Sbjct:  464 IQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTV 543          

HSP 2 Score: 46.2098 bits (108), Expect = 5.792e-28
Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            +PM  Q N +TAQGR DPNQNTG SI  C +
Sbjct:  425 RPMKGQQNTITAQGRKDPNQNTGISIHNCTI 455          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.519e-27
Identity = 52/90 (57.78%), Postives = 69/90 (76.67%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            A DL PV+ + ++YLGRPW+ YSRTV+M+S I D +DPAGW +W  DFAL+TLYYGEY+N GPG+  + RV+WPG+  I   EEA +F+V
Sbjct:  408 APDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSV 497          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.591e-27
Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            A DL PVK + ++YLGRPW++YSRTV+++S I D I PAGW E   DFAL+TLYYGEY+N GPGA  +KRV WPG+  I N  EA +FTV
Sbjct:  422 APDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTV 511          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.673e-27
Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW--SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAE 377
            A DL+PV G++++Y+GRPW ++SRTVV+Q+++ + + P GWS W     F L TL+Y EY N GP + T  RV W G+HV+    +A  FTV +
Sbjct:  424 APDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGK 517          

HSP 2 Score: 39.6614 bits (91), Expect = 3.673e-27
Identity = 16/32 (50.00%), Postives = 23/32 (71.88%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDVI 97
            +P+  Q+N++TAQGR DP QNTG SI    ++
Sbjct:  391 RPLKGQANVITAQGRADPFQNTGISIHNSRIL 422          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 8.094e-27
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  132 IRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            + ++LGRPWK +S TV+M S++   ID  GW  W+GD A  T++YGEY N GPGA T  RVKW G   ++  +EA +FTV
Sbjct:  462 VMTFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFLST-KEANRFTV 540          

HSP 2 Score: 48.1358 bits (113), Expect = 8.094e-27
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            +PM  Q N +TAQGRTDPN NTG SI +C++
Sbjct:  423 RPMKGQQNTITAQGRTDPNMNTGISIHRCNI 453          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.194e-26
Identity = 55/109 (50.46%), Postives = 75/109 (68.81%), Query Frame = 3
Query:   51 TQIKTQGLRSKNVTS*QASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAE 377
            TQ +  G+  +N +   + DL      ++SYLGRPW+E+SRTVVM+S+I + ID +GWS+W+G  AL TLYYGEY N GPG+ T KRV WPG+H++   E+A  FT  E
Sbjct:  421 TQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATE 528          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.887e-26
Identity = 57/126 (45.24%), Postives = 81/126 (64.29%), Query Frame = 3
Query:   33 QPKDGLTQIKT----------QGLRSKNVTS*QASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAEL 380
            QPK G + + T           G   +N     +SDL+    ++++YLGRPW+ +S   V+QS IGD +DPAGW+ W G+  L TL+Y EY NRGPGA TS+RVKW G+ V+ +P++A +FTVA+L
Sbjct:  356 QPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKL 479          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.089e-25
Identity = 59/107 (55.14%), Postives = 69/107 (64.49%), Query Frame = 3
Query:   54 QIKTQGLRSKNVTS*QASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW-SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            + +T G    N T     DL+PVK   +SYLGRPWK +SRTVVM+S I D IDP GW  W   DFA+ TL Y EY N GP   T+ RVKWPG+ V+ N EEA KFTV
Sbjct:  481 KFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTV 586          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.129e-25
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  138 SYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW-SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAEL 380
            +YLGRPWKE+S TV+M++ IG  + P+GW  W SG     ++ YGEY N GPG+  ++RVKW GY  + +  EA KFTVA L
Sbjct:  488 TYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATL 569          

HSP 2 Score: 45.4394 bits (106), Expect = 1.129e-25
Identity = 18/34 (52.94%), Postives = 27/34 (79.41%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDVIAS 103
            +P+S Q N +TAQG+ DPNQ++G SIQ+C + A+
Sbjct:  448 QPLSNQFNTITAQGKKDPNQSSGMSIQRCTISAN 481          
The following BLAST results are available for this feature:
BLAST of CF503915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
PME23_ARATH5.792e-2858.33Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME46_ARATH5.792e-2852.50Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME40_ARATH1.519e-2757.78Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME39_ARATH2.591e-2761.11Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME59_ARATH3.673e-2745.74Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME24_ARATH8.094e-2750.00Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME12_ARATH2.194e-2650.46Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME30_ARATH4.887e-2645.24Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME45_ARATH1.089e-2555.14Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME1_ARATH1.129e-2551.22Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-403 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503915 ID=CF503915; Name=CF503915; organism=Citrus sinensis; type=EST; length=380bp
AAAGCCCATGAGCAAGCAATCCAACATGGTCACAGCCCAAGGACGGACTG
ACCCAAATCAAAACACAGGGACTTCGATCCAAAAATGTGACGTCATAGCA
AGCCTCAGATCTGGAGCCCGTAAAGGGCTCGATCCGTTCGTACTTGGGCC
GGCCTTGGAAAGAATACTCGAGAACAGTTGTAATGCAGTCACACATCGGG
GATCATATCGATCCAGCTGGATGGTCAGAATGGAGTGGAGATTTTGCACT
GAAGACACTGTATTATGGGGAGTATCTGAATAGAGGGCCAGGTGCTGGGA
CTAGCAAAAGAGTGAAATGGCCTGGCTATCACGTTATTACAAACCCAGAA
GAAGCAAAAAAATTTACAGTAGCTGAGCTT
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