CF503915

Overview
NameCF503915
Unique NameCF503915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length380
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.422e-25
Identity = 52/103 (50.49%), Postives = 78/103 (75.73%), Query Frame = 3
Query:   72 LRSKNVTS*QASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAEL 380
            +++ N+T+  +SDL+    ++++YLGRPW+ +S   V+QS IGD +DPAGW+ W G+  L TL+Y EY NRGPGA TS+RVKW G+ V+ +P++A +FTVA+L
Sbjct:  408 IQNCNITA--SSDLDTA--TVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKL 506          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.471e-25
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 3
Query:  102 ASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWS--GDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAE 377
            A DL+PV  S+++Y+GRPW  YSRTVV++++I   + P GWS W+    + L TL+Y EY N GP + T  RV+W G+HV++   +A  F+V +
Sbjct:  428 APDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGK 521          

HSP 2 Score: 37.3502 bits (85), Expect = 1.471e-25
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 2
Query:    5 PMSKQSNMVTAQGRTDPNQNTGTSIQKCDVI 97
            P+  Q+N++TAQGRTD  QNTG SI    +I
Sbjct:  396 PLKGQANVITAQGRTDLFQNTGISIHNSIII 426          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.906e-25
Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 3
Query:  108 DLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAE 377
            D   VK   ++YLGRPWKEYSRT++M + I D + P GW  W G+F L TL+Y E  N GPGA  +KRV WPG   +++ EE  KFT A+
Sbjct:  455 DYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKLSD-EEILKFTPAQ 543          

HSP 2 Score: 34.2686 bits (77), Expect = 1.906e-25
Identity = 13/32 (40.62%), Postives = 21/32 (65.62%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDVI 97
            KP+  Q+  +TA GR DP ++TG  +Q C ++
Sbjct:  420 KPLLNQACPITAHGRKDPRESTGFVLQGCTIV 451          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.499e-25
Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = 3
Query:  105 SDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW--SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAE 377
            SDL PVK    SYLGRPW++YSR +VM+S+I D I   GW+ W  SGD  LKTLY+GE+ N GP A  SKRV W G+H I   EEA  F+V +
Sbjct:  400 SDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI-GFEEANYFSVVK 491          

HSP 2 Score: 31.187 bits (69), Expect = 5.499e-25
Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 2
Query:   14 KQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            K  N++ A GRTD  QNTG ++  C +
Sbjct:  370 KAYNVILANGRTDQRQNTGFALHSCRI 396          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.032e-24
Identity = 43/80 (53.75%), Postives = 58/80 (72.50%), Query Frame = 3
Query:  138 SYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSG--DFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            +YLGRPWK +S+TV+MQS IG  ++PAGW  W+   D   +T++Y EY N GPG+  SKRVKW GY  I++ +EA +FTV
Sbjct:  868 TYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTV 947          

HSP 2 Score: 36.5798 bits (83), Expect = 2.032e-24
Identity = 14/31 (45.16%), Postives = 21/31 (67.74%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            +P+  Q N +TA+G  + NQNTG SI +C +
Sbjct:  828 QPLPNQFNTITAEGTQEANQNTGISIHQCTI 858          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.686e-24
Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = 3
Query:  135 RSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWS-GDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFT 368
            ++YLGRPWKEYSRT++MQS+I   I+P GW+ W+  +F   T YY EY NRGPGA   KR+ W G+      E A+KFT
Sbjct:  270 KTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFT 348          

HSP 2 Score: 36.5798 bits (83), Expect = 2.686e-24
Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            KP   QS MVTAQGRT+P Q     +Q C++
Sbjct:  226 KPAQNQSCMVTAQGRTEPIQKGAIVLQNCEI 256          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.461e-24
Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 3
Query:  108 DLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTVAE 377
            D   VK + ++YLGRPWKEYSRT++M + I D + P GW  W GDF LKTL+Y E  N GPG+  + RV W G   ++  E+  KFT A+
Sbjct:  458 DYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSE-EDILKFTPAQ 546          

HSP 2 Score: 32.7278 bits (73), Expect = 3.461e-24
Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 2
Query:    2 KPMSKQSNMVTAQGRTDPNQNTGTSIQKCDV 94
            KP+  Q+  +TA GR DP ++TG   Q C +
Sbjct:  423 KPLPNQACPITAHGRKDPRESTGFVFQGCTI 453          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.502e-24
Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 3
Query:   54 QIKTQGLRSKNVTS*QASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEW-SGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            + +T G    N       DL+PVK   +SYLGRPWK YSRT++M+S I + IDP GW  W   DFA+ TLYY EY N+G    T+ RVKWPG+ VI N EEA  +TV
Sbjct:  486 KFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVI-NKEEALNYTV 591          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.331e-23
Identity = 53/101 (52.48%), Postives = 66/101 (65.35%), Query Frame = 3
Query:   69 GLRSKNVTS*QASDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            G+   N T   A DL     S  ++LGRPWK YSRTV MQS+I D + P GW EW+G   L T+YYGEY N GPGA T++RV+W GY+++ N  EA  FTV
Sbjct:  495 GISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLL-NLAEAMNFTV 594          
BLAST of CF503915 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.270e-23
Identity = 51/119 (42.86%), Postives = 75/119 (63.03%), Query Frame = 3
Query:   36 PKDGLTQIKTQGLRSKNVTS*QASDLEPVKGS-------IRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITNPEEAKKFTV 371
            P +G+  I  Q   + N T+        VKG+       +++YLGRPW+ Y+RTVV+ +++   I+P GW +W    AL TLYYGEY N GPG+GT  RV W G+HVI++ +EA++FT+
Sbjct:  335 PPNGVNTITAQSRFNPNQTTGIVIHNSVVKGAPGVQLGGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTL 453          
The following BLAST results are available for this feature:
BLAST of CF503915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
PME42_ARATH1.422e-2550.49Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME60_ARATH1.471e-2544.68Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME28_ARATH1.906e-2551.11Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME54_ARATH5.499e-2555.91Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME26_ARATH2.032e-2453.75Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME_PETIN2.686e-2453.16Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME21_ARATH3.461e-2448.89Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME13_ARATH3.502e-2451.40Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME25_ARATH1.331e-2352.48Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME38_ARATH2.270e-2342.86Putative pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-403 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503915 ID=CF503915; Name=CF503915; organism=Citrus sinensis; type=EST; length=380bp
AAAGCCCATGAGCAAGCAATCCAACATGGTCACAGCCCAAGGACGGACTG
ACCCAAATCAAAACACAGGGACTTCGATCCAAAAATGTGACGTCATAGCA
AGCCTCAGATCTGGAGCCCGTAAAGGGCTCGATCCGTTCGTACTTGGGCC
GGCCTTGGAAAGAATACTCGAGAACAGTTGTAATGCAGTCACACATCGGG
GATCATATCGATCCAGCTGGATGGTCAGAATGGAGTGGAGATTTTGCACT
GAAGACACTGTATTATGGGGAGTATCTGAATAGAGGGCCAGGTGCTGGGA
CTAGCAAAAGAGTGAAATGGCCTGGCTATCACGTTATTACAAACCCAGAA
GAAGCAAAAAAATTTACAGTAGCTGAGCTT
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