CF503921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_MARAV (Biosynthetic arginine decarboxylase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=speA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.923e-19 Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 135 VNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 443 VN S+F S+PD W I Q+FP++PI+ L+ R V+ D+TCDSDG+ID+++ G T+LPL E P +G F+ GAY+E LG +HNLFG V V Sbjct: 466 VNFSLFQSLPDVWGIDQIFPVMPINGLNRSLNRRAVIQDITCDSDGRIDQYVDGQGIETTLPLPEH-----DPESPLLMGFFMTGAYQEILGDMHNLFGDTHSVDV 566
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_SHEDO (Biosynthetic arginine decarboxylase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=speA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.284e-19 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 135 VNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 455 VN S+F S+PD W I Q+FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ PY +G F+ GAY+E LG +HNLFG + V D Sbjct: 466 VNFSLFQSLPDAWGIDQVFPVLPLTCLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPV-----PAWDPANPYLIGFFMVGAYQEILGDMHNLFGDTNSAVVFVED 570
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_PROMH (Biosynthetic arginine decarboxylase OS=Proteus mirabilis (strain HI4320) GN=speA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.246e-18 Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 129 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 443 ++VN S+F S+PD W I QLFP++PI LD+ R VL D+TCDSDG ID ++ G T++P+ P +G F+ GAY+E LG +HNLFG + V V Sbjct: 461 FYVNFSLFQSLPDAWGIDQLFPVLPIEGLDKPLDRRAVLLDITCDSDGIIDHYVDGDGVETTMPM-----PAYDPEYPPMIGFFMVGAYQEILGNMHNLFGDTAAVDV 563
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_NEIMB (Biosynthetic arginine decarboxylase OS=Neisseria meningitidis serogroup B GN=speA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.126e-18 Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 3 Query: 132 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVL 446 +VN S+F S+PD W I QLFP+ PI L+E R VL D+TCDSDG ID +I G ++P+ + E P LG F+ GAY+E LG +HNLFG + V+ Sbjct: 458 YVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDHYIDGDGIAGTMPMPDY-----PEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVV 560
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_NEIMA (Biosynthetic arginine decarboxylase OS=Neisseria meningitidis serogroup A GN=speA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.126e-18 Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 3 Query: 132 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVL 446 +VN S+F S+PD W I QLFP+ PI L+E R VL D+TCDSDG ID +I G ++P+ + E P LG F+ GAY+E LG +HNLFG + V+ Sbjct: 458 YVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDHYIDGDGIAGTMPMPDY-----PEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVV 560
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_AERS4 (Biosynthetic arginine decarboxylase OS=Aeromonas salmonicida (strain A449) GN=speA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.777e-18 Identity = 44/98 (44.90%), Postives = 64/98 (65.31%), Query Frame = 3 Query: 138 NLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG 422 N S+F S+PD W IGQ+FP++P+ LD RG+L D+TCDSDG+++ ++ G ++LP+ + E Y+G FL GAY+E LG +HNLFG Sbjct: 463 NFSLFQSLPDAWGIGQVFPVMPLTGLDRPLSRRGILMDITCDSDGQVEHYVDGLGVESTLPMPQY-----EENEVCYVGFFLVGAYQEILGDLHNLFG 555
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_VIBVY (Biosynthetic arginine decarboxylase OS=Vibrio vulnificus (strain YJ016) GN=speA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.627e-18 Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 129 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 455 + VN S+F S+PD W I Q+FP++P+ L R V+ D+TCDSDG ID ++ G ++LP+ E PY +G FL GAY+E LG +HNLFG V V D Sbjct: 468 FFVNFSLFQSLPDSWGIDQVFPVLPLSGLQNAADRRAVMLDITCDSDGAIDAYVDGQGIESTLPV-----PAWNEDEPYLMGFFLVGAYQEILGDMHNLFGDTHSVVVNVGD 574
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_VIBVU (Biosynthetic arginine decarboxylase OS=Vibrio vulnificus GN=speA PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 3.627e-18 Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 129 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 455 + VN S+F S+PD W I Q+FP++P+ L R V+ D+TCDSDG ID ++ G ++LP+ E PY +G FL GAY+E LG +HNLFG V V D Sbjct: 469 FFVNFSLFQSLPDSWGIDQVFPVLPLSGLQNAADRRAVMLDITCDSDGAIDAYVDGQGIESTLPV-----PAWNEDEPYLMGFFLVGAYQEILGDMHNLFGDTHSVVVNVGD 575
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_PHOLL (Biosynthetic arginine decarboxylase OS=Photorhabdus luminescens subsp. laumondii GN=speA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.736e-18 Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 129 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 455 ++VN S+F S+PD W I QLFP++PI LD+ R VL D+TCDSDG +D ++ G ++P+ C P +G F+ GAY+E LG +HNLFG + + V D Sbjct: 461 FYVNFSLFQSLPDAWGIDQLFPVLPIEGLDKPLDRRAVLLDITCDSDGIVDHYVDGDGVAATMPM-PAYDPDC----PPMIGFFMVGAYQEILGNMHNLFGDTAAIDVYVFD 567
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_VIBPA (Biosynthetic arginine decarboxylase OS=Vibrio parahaemolyticus GN=speA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 8.079e-18 Identity = 59/181 (32.60%), Postives = 86/181 (47.51%), Query Frame = 3 Query: 27 QFKDGTLGIEQLATVDGLCDFVAKEIGASDPVRT-----------------YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGD 509 QF G L +EQ A + L + E+ + + VN S+F S+PD W I Q+FP++P+ L + R V+ D+TCDSDG ID ++ G ++LP+ + PY +G FL GAY+E LG +HNLFG V+ D F ++ G S D Sbjct: 417 QFATGVLNLEQRAWAEQLSLRIYFELSRKMSTKNRFHRPILDELSERLADKFFVNFSLFQSLPDAWGIDQVFPVLPLSGLGDAEERRAVMLDITCDSDGAIDHYVDGQGIESTLPV-----PAWSKDKPYLMGFFLVGAYQEILGDMHNLFGDTHSA-VVNVDEHGQFEISYINEGDSVED 591 The following BLAST results are available for this feature:
BLAST of CF503921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503921 ID=CF503921; Name=CF503921; organism=Citrus sinensis; type=EST; length=509bpback to top |