CF503935

Overview
NameCF503935
Unique NameCF503935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.722e-39
Identity = 79/173 (45.66%), Postives = 117/173 (67.63%), Query Frame = 1
Query:   64 YANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            +A QLA  ++LPM +++  EL + EI+   G    +  ++IA+ L T N DAP M+DRILRLL+ YSVV CS+ +   +R+Y L  V KY   N+DGV +  L  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G DP+FNK FN  M +++++ M  + ++Y+G
Sbjct:    3 FAMQLASASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQG 173          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.148e-37
Identity = 80/183 (43.72%), Postives = 116/183 (63.39%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAK-LCASDIAAQL--LTKNKDAPMMLDRILRLLASYSVVECSLDASGAR--RLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            +++  YA QLA  ++LPM ++   ELG+ E+L    P  K L   ++ A+L     N DA  M+DR+LRLLASY VV+C ++    +  R YS   V K+  PN+DGV +  L  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G DP+FN+ FN  M N++ ++   +LE Y G
Sbjct:   14 EEACMYAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTG 196          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.540e-35
Identity = 78/183 (42.62%), Postives = 113/183 (61.75%), Query Frame = 1
Query:   43 ERDQSFA-YANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDAS--GARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            ++D+  A  A  LA     PM +++ +EL I +I  K G G  +  S+IA+Q+  KN +AP++LDR+LRLLAS+SV+ C L     G++R+Y    +  Y   N     LGPL+ +  DKV ++SW  L D ILEGG+PF RAHG+  F+Y G D +FN  FN  M ++T LVM  +L++Y G
Sbjct:   16 DKDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNG 198          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.626e-35
Identity = 78/185 (42.16%), Postives = 114/185 (61.62%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAK--LCASDIAAQLLTKNKD---APMMLDRILRLLASYSVVECSLDASGAR--RLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            +++  YA QLA  ++LPM ++   ELG+ E+L K   G K  L   ++ A++     D   A  M+DR+LRLLASY VV C ++    R  R YS   V K+  PN+DGV +  L  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G D +FN+ FN  M N++ ++   +L+ Y G
Sbjct:   14 EEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTG 198          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.103e-33
Identity = 77/188 (40.96%), Postives = 116/188 (61.70%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKV------GPGAKLCASDIAAQLLTK-NKDAPMMLDRILRLLASYSVVECSLDASGARRL---YSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            +++  YA QLA  ++LPM ++   ELG+ E L         G  A L  +++A +L +K N  A  M+DR+LRLLASY+VV C ++     +L   Y+   V K+  PN+DGV +  L  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G D +FN+ FN  M N++ ++   +L+ Y G
Sbjct:   14 EEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTG 201          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.322e-30
Identity = 72/186 (38.71%), Postives = 111/186 (59.68%), Query Frame = 1
Query:   34 VDGERDQSFAYANQLAMGTM--LPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGG-IPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            VD    +   Y + L +  +  LPMA++   EL +FEI+ + GP A+L  SDI A++ TKN  A + LDRILR+L + S++  S   SG  R+Y LN  S+  V ++D V + P++    DK  ++S+  +KD +LE G IPF+R HG+  F+YAG + + NK FN AM   +++    + + YKG
Sbjct:   29 VDMAAQEGVNYLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTTKSG--RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKG 212          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.819e-21
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGP-GAKLCASDIAAQL--LTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIP-FNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            D +   A  L    + P  +    +L +FEI+ K  P GA +  S+IA++L   T++ D P  LDR+LRLLASYSV+  +   ++  GA R+Y L+ V KY VP++    L      +     L+ W   K+A+++  I  F   HGV  +E+ G D K N+ FN +M +  +  M  +LE Y G
Sbjct:   22 DSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTG 206          
The following BLAST results are available for this feature:
BLAST of CF503935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
OMT1_CHRAE8.722e-3945.66Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_SACOF2.148e-3743.72Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
IMT1_MESCR1.540e-3542.62Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE2.626e-3542.16Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ1.103e-3340.96Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA3.322e-3038.71(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA2.819e-2134.59Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-423 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503935 ID=CF503935; Name=CF503935; organism=Citrus sinensis; type=EST; length=584bp
GAGAAATTCAAGAAACTTAAAATGGATTCTATAGTTGATGGAGAAAGAGA
CCAAAGCTTTGCATATGCTAATCAATTGGCGATGGGTACAATGCTACCCA
TGGCCATTCAAACGGTGTATGAGCTAGGCATTTTCGAGATCCTAGACAAA
GTTGGTCCTGGTGCAAAGCTCTGTGCTTCAGATATTGCAGCCCAATTGCT
CACCAAGAACAAAGACGCACCCATGATGCTGGATCGGATTCTCAGGCTTC
TGGCTAGCTACAGCGTTGTTGAATGCTCACTTGATGCTTCTGGTGCCCGG
AGACTATATAGTTTGAATTCTGTCTCCAAATACTATGTGCCTAACAAAGA
TGGCGTCTTACTAGGACCCCTAATACAAATAGTTCAGGACAAGGTCTTTC
TGAAGAGCTGGTCCCAACTCAAAGATGCTATTCTTGAAGGAGGAATTCCA
TTTAATCGAGCCCATGGAGTGCATGTATTTGAGTACGCAGGATTGGACCC
TAAGTTCAATAAACATTTTAACACAGCAATGTATAACTATACCTCTCTGG
TTATGAGCAACATTCTTGAATCTTACAAGGGTTT
back to top