CF503937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_GILMI (40S ribosomal protein S19 OS=Gillichthys mirabilis GN=rps19 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.658e-27 Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TVKDV+ EFV+A +A LK+SGK+++P W D+VK + KELAP D +W+Y+RAAS R +YLR G GVGS +IYGG +RNG P H+ + S +AR +L Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_EMENI (40S ribosomal protein S19 OS=Emericella nidulans GN=rps19 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.152e-26 Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TV+DV +F+ AY+A LKR GK+ +P W D VKT+ EL P D DWYYVRAA++AR IYLR+ +GVG R+++G +K GSRP H +SGA+ R +L Sbjct: 5 TVRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19G_ASCSU (40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.395e-25 Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 79 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 M A +VKDV HE V+ + LK+SGK+++P W+D+ K KELAP + DWYYVR AS+AR++Y+R GV + R +YGGSKR G P HF K+SG++ R L Sbjct: 1 MVKATSVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKAL 105
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_PAGMA (40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.379e-25 Identity = 52/100 (52.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TVKDV+ EFV+A +A LK+SGK+++P W D+VK + KELAP D +W+Y+R+AS R +YLR G GVGS +IYG +RNG P H+ S +AR +L Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_ENTHI (40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 97 VKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 +KDV +F+KAY+ HLK+SGK+E+P W D VKT KELAP +PDW Y+RAA++ARK+YL G+GV + RR YG P H SG + R+IL Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYIL 105
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19_CAEEL (40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.181e-24 Identity = 51/102 (50.00%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 79 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIAR 384 M A ++KDV HE K+ + LK+SGK+++P W+D+VK KELAP DPDW+Y RAAS+AR +Y R G+G+F+++YGG+KR G P HF S+G R Sbjct: 1 MTRATSIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFRPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLR 101
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19B_YEAST (40S ribosomal protein S19-B OS=Saccharomyces cerevisiae GN=RPS19B PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.063e-21 Identity = 46/101 (45.54%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPD-WYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 +V+DV+ +F+ AY++ L+R GK+E+P + DIVKT+ E+ P D + W+Y RAAS+AR IY+R+ +GVG ++YGG+K G RP +SG+I R +L Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVL 105
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19B_DROME (40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 6.063e-21 Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TVK++ H K +A LK+SGK+ +P +KT +FKE AP D DW+Y R AS+ R +YLR GVG+F ++Y G KRNG RP C+SS R L Sbjct: 5 TVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKAL 104
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19A_YEAST (40S ribosomal protein S19-A OS=Saccharomyces cerevisiae GN=RPS19A PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.063e-21 Identity = 46/101 (45.54%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPD-WYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 +V+DV+ +F+ AY++ L+R GK+E+P + DIVKT+ E+ P D + W+Y RAAS+AR IY+R+ +GVG ++YGG+K G RP +SG+I R +L Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVL 105
BLAST of CF503937 vs. ExPASy Swiss-Prot
Match: RS19E_METTH (30S ribosomal protein S19e OS=Methanobacterium thermoautotrophicum GN=rps19e PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.804e-18 Identity = 44/100 (44.00%), Postives = 58/100 (58.00%), Query Frame = 1 Query: 94 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHIL 393 TV DV + + LK K++ P W + VKT KE P +PDW+YVRAA++ R++Y+ +GV S R YGG K GSRP F + SGAI R L Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRAL 102 The following BLAST results are available for this feature:
BLAST of CF503937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503937 ID=CF503937; Name=CF503937; organism=Citrus sinensis; type=EST; length=394bpback to top |