CF503939 | Citrus Genome Database

Overview


Name	CF503939
Unique Name	CF503939
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	355

Libraries


Library Name	Type
Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H5_ORYSJ (Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.360e-28
Identity = 47/97 (48.45%), Postives = 66/97 (68.04%), Query Frame = 2

Query:   80 GSVDTGDRCRYNHPRNXXXXXXXXXX-----TGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            G+   G+ CRYNHPR+               + +YP+RPG+P+C++Y+K GTCKFG++CK+ HP+   GS+  V LN  GYPLR GEK+C+YY+KTG
Sbjct:   64 GACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPRE--GSVQAVMLNSSGYPLRSGEKDCTYYVKTG 158

HSP 2 Score: 36.965 bits (84), Expect = 2.360e-28
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 1

Query:   34 PQRHGVPDCVFYMRTGVCGY 93
            P+R G  DCV+Y+RTG CGY
Sbjct:   49 PERPGEADCVYYLRTGACGY 68

HSP 3 Score: 84.3445 bits (207), Expect = 2.051e-16
Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 2

Query:  167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            +P RPG+P CQ+YLKTG+CKFG++CK+HHP++     S+  L+  G PLRPG + C+YY + G
Sbjct:  296 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHG 358

HSP 4 Score: 68.1662 bits (165), Expect = 4.429e-14
Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 2

Query:   80 GSVDTGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRP 319
            G+   G  C+Y+HPR           +G YP R GE  C +Y+KTG CKFG++CKFHHP+   G +S  P N+Y  P++P
Sbjct:  114 GTCKFGSNCKYDHPREGSVQAVMLNSSG-YPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEI--GGVSETP-NMYP-PVQP 188

HSP 5 Score: 30.4166 bits (67), Expect = 4.429e-14
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 1

Query:   31 YPQRHGVPDCVFYMRTGVCGY 93
            YP+R G P C +YM+ G C +
Sbjct:   98 YPERPGQPVCEYYMKNGTCKF 118

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H3_ARATH (Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.168e-23
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 2

Query:   95 GDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            G  CRYNHP +            + P+R G+P C+++LKTG CK+G +CK+HHPK   G+   V  N+ G P+R GEK C YYL+TG
Sbjct:   65 GSSCRYNHPTHLPQDVAYYKE--ELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQP-VMFNVIGLPMRLGEKPCPYYLRTG 148

HSP 2 Score: 39.6614 bits (91), Expect = 1.168e-23
Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 1

Query:   13 LKVNES-------YPQRHGVPDCVFYMRTGVCGY 93
            +KVNE+       YP R G  DC FY+RTG+CGY
Sbjct:   31 MKVNETGVEELNPYPDRPGERDCQFYLRTGLCGY 64

HSP 3 Score: 63.5438 bits (153), Expect = 1.645e-13
Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 2

Query:   80 GSVDTGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGG 271
            G+   G  C+Y+HP++              P R GE  C +YL+TGTC+FG +CKFHHP+   G
Sbjct:  103 GACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNG 166

HSP 4 Score: 33.113 bits (74), Expect = 1.645e-13
Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 1

Query:   25 ESYPQRHGVPDCVFYMRTGVCGY 93
            E  P+R G PDC ++++TG C Y
Sbjct:   85 EELPERIGQPDCEYFLKTGACKY 107

HSP 5 Score: 71.633 bits (174), Expect = 1.376e-12
Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 2

Query:  167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            YPDRPGE  CQFYL+TG C +G+SC+++HP H    +++    +   P R G+ +C Y+LKTG
Sbjct:   44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEEL---PERIGQPDCEYFLKTG 103

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H26_ARATH (Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis thaliana GN=ZFN2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.621e-19
Identity = 38/92 (41.30%), Postives = 50/92 (54.35%), Query Frame = 2

Query:   80 GSVDTGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            G    G+ CRYNHP                P+R G+P C+    TG CK+G +CK+HHPK   G+   V  N+ G P+R GEK C YY++TG
Sbjct:   57 GQCGYGNSCRYNHPLTNLPQGIIYYRD-QLPERVGQPDCE----TGACKYGPTCKYHHPKDRNGA-GPVLFNVLGLPMRQGEKPCPYYMQTG 142

HSP 2 Score: 36.5798 bits (83), Expect = 5.621e-19
Identity = 17/34 (50.00%), Postives = 20/34 (58.82%), Query Frame = 1

Query:   13 LKVNES-------YPQRHGVPDCVFYMRTGVCGY 93
            +KVNE        YP R G  DC F++RTG CGY
Sbjct:   28 MKVNEDNMEQSSPYPDRPGERDCQFFLRTGQCGY 61

HSP 3 Score: 67.0106 bits (162), Expect = 3.389e-11
Identity = 30/81 (37.04%), Postives = 42/81 (51.85%), Query Frame = 2

Query:   71 CELGSVDTGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHP-KHSGGSMSHVPLNIYGYP 310
            CE G+   G  C+Y+HP++              P R GE  C +Y++TG C+FG +CKFHHP  HS  S  H    +  +P
Sbjct:   94 CETGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFP 174

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.916e-18
Identity = 42/116 (36.21%), Postives = 56/116 (48.28%), Query Frame = 2

Query:   74 ELGSVDTGDRCRYNHPRNXXXXXXXXXXTGD-YPDRPGEPICQFYLKTGTCKFGASCKFHHP---------KHSGGSMSH------------VPLNIYGYPLRPGEKECSYYLKTG 355
            + GS   G  C YNHP              + +P RPGEP C +Y+K G+CKFG +C+F+HP         ++  G+  H            V LN+ G PLRPG   CSYY+  G
Sbjct:   55 KFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRG 170

HSP 2 Score: 33.8834 bits (76), Expect = 5.916e-18
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 1

Query:   16 KVNESYPQRHGVPDCVFYMRTGVCGY 93
            KV E +P+R G PDC +Y++ G C +
Sbjct:   36 KVEEQHPRRPGEPDCSYYVKFGSCKF 61

HSP 3 Score: 68.1662 bits (165), Expect = 1.521e-11
Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 2

Query:  167 YPDRPGEPICQFYLKTGTCKFGASCKFHH--PKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            +P RPGEP C +Y+K G+CKFG SC ++H  P+   G+    P     +P RPGE +CSYY+K G
Sbjct:   41 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAE--QFPRRPGEPDCSYYVKFG 103

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H42_ORYSJ (Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa subsp. japonica GN=Os06g0519400 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.022e-17
Identity = 44/114 (38.60%), Postives = 52/114 (45.61%), Query Frame = 2

Query:   74 ELGSVDTGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHP------------------KHSGG--SMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            E GS   G RC YNHP              ++P RPGE  C  YL+ G CK+G +C+F+HP                   HS G     HV LN  G PLRPG   CSYY+  G
Sbjct:   90 EFGSCKFGMRCLYNHPAKHAGGCDKL----EHPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRG 199

HSP 2 Score: 32.7278 bits (73), Expect = 1.022e-17
Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 1

Query:   25 ESYPQRHGVPDCVFYMRTGVCGY 93
            + YP+R GVPDC +Y+  G C +
Sbjct:   74 QEYPRRPGVPDCSYYVEFGSCKF 96

HSP 3 Score: 65.4698 bits (158), Expect = 9.861e-11
Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 2

Query:  164 DYPDRPGEPICQFYLKTGTCKFGASCKFHHP-KHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            +YP RPG P C +Y++ G+CKFG  C ++HP KH+GG       +   +P RPGE +C +YL+ G
Sbjct:   75 EYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGG------CDKLEHPQRPGEHDCLHYLRFG 133

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 8.245e-17
Identity = 35/94 (37.23%), Postives = 48/94 (51.06%), Query Frame = 2

Query:   80 GSVDTGDRCRYNHP--RNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            GS   G  C++NHP  R             +  + P    C++Y +TG CK+G SC+F H K      S   LN  G P+RPGEKEC +Y++ G
Sbjct:  114 GSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNG 207

HSP 2 Score: 31.9574 bits (71), Expect = 8.245e-17
Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 1

Query:    7 SDLKVNESYPQRHGVPDCVFYMRTGVCGY 93
            S+ ++   YP R    DC FYMRTG C Y
Sbjct:   90 SEKRMMMVYPVRPDSEDCSFYMRTGSCKY 118

HSP 3 Score: 70.4774 bits (171), Expect = 3.065e-12
Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 2

Query:  164 DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            ++P+RP +P C +YLKTG CKF   CK+HHPK+     +    N  G PLRP +  C++Y + G
Sbjct:  330 EFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYG 393

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.810e-16
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 2

Query:   80 GSVDTGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEP---ICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            GS   G  C++NHP              +  D  G+     C++Y +TG CK+G +C+F+H     G  S   LN  G PLRPGE EC YY++ G
Sbjct:  123 GSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNG 217

HSP 2 Score: 33.8834 bits (76), Expect = 1.810e-16
Identity = 16/27 (59.26%), Postives = 17/27 (62.96%), Query Frame = 1

Query:   22 NES---YPQRHGVPDCVFYMRTGVCGY 93
            NES   YP R G  DC FYMRTG C +
Sbjct:  101 NESENVYPVRPGAEDCSFYMRTGSCKF 127

HSP 3 Score: 73.559 bits (179), Expect = 3.621e-13
Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 2

Query:  164 DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            ++P+RP +P C +Y+KTG CKF  +CK+HHPK+    +    LN  G PLRP +  C+YY + G
Sbjct:  342 EFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYG 405

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H37_ARATH (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.795e-16
Identity = 45/113 (39.82%), Postives = 56/113 (49.56%), Query Frame = 2

Query:   95 GDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHS---------GGSMS-----------HVPL------NIYGYPLRPGEKECSYYLKTG 355
            G +C++NHPR           +   P+RP EP+C FY+KTG CKFG SCKFHHPK           G S+            HV        N  G P+R GE +C +YLKTG
Sbjct:  243 GSKCKFNHPREEAAVSVETQDS--LPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTG 353

HSP 2 Score: 72.0182 bits (175), Expect = 5.439e-15
Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = 2

Query:   95 GDRCRYNHP------RNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            G+ CR++HP                    +YP+RPGEP C +Y+KT  CK+G+ CKF+HP+           ++   P RP E  C++Y+KTG
Sbjct:  192 GESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSL---PERPSEPMCTFYMKTG 281

HSP 3 Score: 29.6462 bits (65), Expect = 5.439e-15
Identity = 11/21 (52.38%), Postives = 13/21 (61.90%), Query Frame = 1

Query:   31 YPQRHGVPDCVFYMRTGVCGY 93
            YPQR G  DC  YM+T  C +
Sbjct:  171 YPQRAGEKDCTHYMQTRTCKF 191

HSP 4 Score: 77.411 bits (189), Expect = 2.508e-14
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 2

Query:  167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMS-------HVPLNIYGYPLRPGEKECSYYLKTG 355
            YP RPG+  C +Y+KTG CKFG  CKFHHP     +M+       +V L++ GYP R G   C YY+KTG
Sbjct:  417 YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTG 486

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H8_ORYSJ (Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=Os01g0616400 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.913e-15
Identity = 35/100 (35.00%), Postives = 52/100 (52.00%), Query Frame = 2

Query:   95 GDRCRYNHPR------NXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMS-------HVPLNIYGYPLRPGEKECSYYLKTG 355
            G  C+++HP+                    YP++ GEP C F++KTG CKFG+ CKF+HPK    +++       H+  +    P+RP E  CS+Y KTG
Sbjct:  123 GGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTG 222

HSP 2 Score: 31.5722 bits (70), Expect = 1.913e-15
Identity = 12/21 (57.14%), Postives = 13/21 (61.90%), Query Frame = 1

Query:   31 YPQRHGVPDCVFYMRTGVCGY 93
            YPQR G  DC FYM T  C +
Sbjct:  102 YPQRPGEKDCAFYMMTRTCKF 122

HSP 3 Score: 65.4698 bits (158), Expect = 9.861e-11
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 2

Query:  167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPK--HSGG--SMSHVPLNI-YGYPLRPGEKECSYYLKTG 355
            YP RPGE  C FY+ T TCKFG SCKF HP+    GG  +      N+   YP + GE +C +++KTG
Sbjct:  102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPDCPFFMKTG 169

[Close]

BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H13_ARATH (Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis thaliana GN=At1g48195 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.176e-13
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 2

Query:  167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355
            +P+RPGEP C +YL+TG C    +CK+HHPK+   S     LN  G PLRPG+  C +Y + G
Sbjct:    6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYSRFG 68

The following BLAST results are available for this feature:

BLAST of CF503939 vs. ExPASy Swiss-Prot

BLAST of CF503939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20


Match Name	E-value	Identity	Description
C3H5_ORYSJ	2.360e-28	48.45	Zinc finger CCCH domain-containing protein 5 OS=Or...	[more]
C3H3_ARATH	1.168e-23	45.98	Zinc finger CCCH domain-containing protein 3 OS=Ar...	[more]
C3H26_ARATH	5.621e-19	41.30	Zinc finger CCCH domain-containing protein 26 OS=A...	[more]
C3H43_ORYSJ	5.916e-18	36.21	Zinc finger CCCH domain-containing protein 43 OS=O...	[more]
C3H42_ORYSJ	1.022e-17	38.60	Zinc finger CCCH domain-containing protein 42 OS=O...	[more]
C3H67_ARATH	8.245e-17	37.23	Zinc finger CCCH domain-containing protein 67 OS=A...	[more]
C3H43_ARATH	1.810e-16	36.84	Zinc finger CCCH domain-containing protein 43 OS=A...	[more]
C3H37_ARATH	7.795e-16	39.82	Zinc finger CCCH domain-containing protein 37 OS=A...	[more]
C3H8_ORYSJ	1.913e-15	35.00	Zinc finger CCCH domain-containing protein 8 OS=Or...	[more]
C3H13_ARATH	6.176e-13	47.62	Zinc finger CCCH domain-containing protein 13 OS=A...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_119000-427 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_E04 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF503939 ID=CF503939; Name=CF503939; organism=Citrus sinensis; type=EST; length=355bp
TGGCAATCGGACCTGAAGGTGAACGAATCTTACCCACAGCGCCATGGCGT
GCCGGACTGTGTGTTCTACATGCGAACTGGGGTCTGTGGATACCGGTGAC
AGGTGTCGTTACAATCACCCTCGCAATCGTGCTGCGGTTGAGGCTGCTGT
AAGGGCTACAGGAGATTATCCAGATCGACCAGGGGAACCCATATGTCAGT
TTTACTTGAAAACTGGAACCTGTAAATTTGGTGCATCCTGCAAATTCCAC
CACCCAAAACATTCAGGTGGATCCATGAGTCATGTTCCACTGAATATATA
TGGATACCCGCTACGACCGGGTGAGAAAGAATGCTCCTACTATTTGAAAA
CGGGG