CF503941

Overview
NameCF503941
Unique NameCF503941
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length422
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503941 vs. ExPASy Swiss-Prot
Match: PT110_ORYSJ (Probable inorganic phosphate transporter 1-10 OS=Oryza sativa subsp. japonica GN=PHT1-10 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.023e-28
Identity = 48/102 (47.06%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  115 FALIVSSAFNAAFKAPA--YEDDPIASTAPQ-ADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKV---LQVELEAEEQKIQELDR 402
            F ++ SSA   A  A    Y   P     P+ AD  WRII+M GA+PAALTYYWRM MPETARYTALV ++  +A +D+ +V   L +   AEE+    L R
Sbjct:  171 FGILASSAVTMAVAAAFDHYTGYPAPLDTPECADLAWRIILMAGAVPAALTYYWRMSMPETARYTALVERDVVKATNDIGRVLADLDLGAVAEEEVAAALSR 272          

HSP 2 Score: 64.3142 bits (155), Expect = 2.023e-28
Identity = 30/34 (88.24%), Postives = 34/34 (100.00%), Query Frame = 3
Query:    3 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 104
            YPLSATIMSE+AN++TRGAFIAAVF+MQGFGILA
Sbjct:  142 YPLSATIMSEFANRRTRGAFIAAVFSMQGFGILA 175          
BLAST of CF503941 vs. ExPASy Swiss-Prot
Match: PHT18_ARATH (Probable inorganic phosphate transporter 1-8 OS=Arabidopsis thaliana GN=PHT1-8 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.024e-28
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 1
Query:  106 GGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVL 354
            G + +  V+ A   AFK      +  A+   +AD  WR+I+M+GALPAALT+YWRM MPETARYTALV  N  QAA DM +V+
Sbjct:  167 GILVSSAVTMAVCVAFKRSGGGLEVDAAAPTEADLAWRLILMIGALPAALTFYWRMLMPETARYTALVENNIVQAAKDMQRVM 249          

HSP 2 Score: 61.6178 bits (148), Expect = 2.024e-28
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 3
Query:    3 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 101
            YPLSATIMSE+ANK+TRGAFIAAVF+MQG GIL
Sbjct:  137 YPLSATIMSEFANKRTRGAFIAAVFSMQGLGIL 169          
BLAST of CF503941 vs. ExPASy Swiss-Prot
Match: PHT19_ORYSJ (Probable inorganic phosphate transporter 1-9 OS=Oryza sativa subsp. japonica GN=PHT1-9 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.426e-28
Identity = 44/83 (53.01%), Postives = 55/83 (66.27%), Query Frame = 1
Query:  115 FALIVSSAFNAAFKAPA--YEDDPIASTAPQ-ADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVL 354
            F ++VSSA   A  A    Y   P     P+ AD  WRII+M GA+PAALTYYWRM MPETARYTALV ++  +A +D+ +VL
Sbjct:  178 FGILVSSAVTMAVAAAFDHYTGYPAPLDTPECADLAWRIILMAGAVPAALTYYWRMSMPETARYTALVERDVVKATNDIGRVL 260          

HSP 2 Score: 62.7734 bits (151), Expect = 3.426e-28
Identity = 29/33 (87.88%), Postives = 33/33 (100.00%), Query Frame = 3
Query:    3 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 101
            YPLSATIMSE+AN++TRGAFIAAVF+MQGFGIL
Sbjct:  149 YPLSATIMSEFANRRTRGAFIAAVFSMQGFGIL 181          
The following BLAST results are available for this feature:
BLAST of CF503941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PT110_ORYSJ2.023e-2847.06Probable inorganic phosphate transporter 1-10 OS=O... [more]
PHT18_ARATH2.024e-2851.81Probable inorganic phosphate transporter 1-8 OS=Ar... [more]
PHT19_ORYSJ3.426e-2853.01Probable inorganic phosphate transporter 1-9 OS=Or... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-429 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503941 ID=CF503941; Name=CF503941; organism=Citrus sinensis; type=EST; length=422bp
ACTACCCACTTTCCGCCACTATCATGTCTGAATATGCTAACAAGAAGACT
CGTGGCGCTTTCATTGCCGCTGTATTTGCAATGCAGGGCTTTGGAATCTT
AGCCTGGTGGTATATTTGCACTTATTGTCTCTTCTGCATTCAATGCTGCG
TTTAAGGCTCCAGCTTATGAGGACGATCCTATTGCTTCAACCGCCCCTCA
AGCCGACTACCTTTGGCGTATAATCGTAATGGTTGGAGCACTTCCGGCTG
CACTTACCTACTACTGGAGGATGAAGATGCCGGAGACTGCTCGTTACACC
GCCCTTGTTGCTAAGAACGCAAAGCAAGCTGCATCCGATATGTCTAAGGT
TTTACAGGTGGAGCTTGAGGCAGAGGAACAGAAGATTCAGGAACTGGATC
GGGATAAAGGCAATGGATACGG
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